Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1917 ATGGACGGAGTTAATAACAGCGGCTCCGGCGGCGGCACACAGACGCCAGCTCCGGCTCCCATTCCTAATACCAACGCGCCCCCGCCGTTTCTTAGCAAGACATATGACATGGTGGATGACCCGTCCAGTGACGCGATCGTTTCTTGGAGCTCAACCAACAATAGCTTTGTTGTTTGGAACCCTCCTGAGTTTGCCAGGGACCTCTTGCCAAAGTACTTTAAGCACAATAACTTCTCCAGCTTTGTTAGGCAGTTGAATACATATGGTTTCAGGAAGGTCGATCCAGATCGGTGGGAATTTGCAAATGAGGGCTTTTTGAGGGGTCAGAAGCACTTGCTTAAGAGTATAACCCGGCGAAAACCTGCCCATGGTCATGGTCATGGTCATCAACAGGCACAACAATCTCATGGGCAGAGTTCATCTGTAGGGCCATGTGTAGAGGTTGGGAAGTTTGGTCTAGAGGAAGAGGTTGAAATGCTCAAAAGAGATAAGAATGTGCTCATGCAGGAGCTTGTGAGGTTGAGACAGCAGCAACAGGCCACTGATAACCAGATGCAACAAATGGTTCAGCGCGTTCAGGGAATGGAACAACGTCAGCAGCAAATGATGTCATTCCTTGCAAAGGCTGTCCAGAGCCCTGGCTTCTTGACTCAGTTTGTACAACAGCAAAACGAGAGCAATAGGCGTATAACTGAAGCCAGCAAAAAACGACGGCTTAAGCGGGAAGGTATTGCTGAAACAGAGTGTGCTACTGCTTCTGATGGACAAATTGTTAAGTATCAACCTTTGATGAATGAAGCTGCTAAAGCAATGCTAAGGCAGATCATGAAATTGGATACCCCTTGGCTAGAATCTTTCAATAATAACTCAGATAATTATTTGATTGGCGATGGCTCAACATCGTCAGGGGCAATGGACAGTGGCAGTACTTCAAACCGTAGCTGTGGAGTAACCCTTCAAGAGGTCCCCCCACCTTCAGTGAATGCTCCCTCAGCTGGAAAATCTGAAAAGCAATCTTCTCTAGAGTCTGCAGCTTCTGGAAAAGTTACGGCTGCTCAATATCCTGATGTAAATGTGCTAGTTGGTGCATCTGAGAAACCTTCTGACCCTATTTCTGAGGTGGATATCATGCCTGAGCTTTCTCCAATACACGAGATGGTGACGGGAACTATTCTTGATATTCCTGAAGAGAATTATATTGGACCTGAAACAGGAAATGAGGGATTCATGGATCCTAATTTGTTGGGGGTAAACGGGTCGATGCCCATTGATATTGGTAGTATTTCACCTGATACAGACATTGATGACTTGCTACGAAACTCTTCTTTTTGGGATGACTTGGTGCAAAGTCCACTGCCCGAGGATATTGAGATTGATGCTGCTGAAGTGTCCAAGGGAAATGAGGGGCAGCCAGTGGAAAATGGATGGGACAAAGCGGAACATATGGATCAACTTACAGAGCAGATGGGTCTTCTTTCTTCTGAAACAAAGAGAGTTTGA 1500 0.4633 MDGVNNSGSGGGTQTPAPAPIPNTNAPPPFLSKTYDMVDDPSSDAIVSWSSTNNSFVVWNPPEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGQKHLLKSITRRKPAHGHGHGHQQAQQSHGQSSSVGPCVEVGKFGLEEEVEMLKRDKNVLMQELVRLRQQQQATDNQMQQMVQRVQGMEQRQQQMMSFLAKAVQSPGFLTQFVQQQNESNRRITEASKKRRLKREGIAETECATASDGQIVKYQPLMNEAAKAMLRQIMKLDTPWLESFNNNSDNYLIGDGSTSSGAMDSGSTSNRSCGVTLQEVPPPSVNAPSAGKSEKQSSLESAASGKVTAAQYPDVNVLVGASEKPSDPISEVDIMPELSPIHEMVTGTILDIPEENYIGPETGNEGFMDPNLLGVNGSMPIDIGSISPDTDIDDLLRNSSFWDDLVQSPLPEDIEIDAAEVSKGNEGQPVENGWDKAEHMDQLTEQMGLLSSETKRV 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1917 499 PRINTS Heat shock factor (HSF) domain signature 68 80 IPR000232 GO:0003700|GO:0006355|GO:0043565
Prci5g1917 499 PRINTS Heat shock factor (HSF) domain signature 30 53 IPR000232 GO:0003700|GO:0006355|GO:0043565
Prci5g1917 499 PRINTS Heat shock factor (HSF) domain signature 81 93 IPR000232 GO:0003700|GO:0006355|GO:0043565
Prci5g1917 499 MobiDBLite consensus disorder prediction 302 347 - -
Prci5g1917 499 Gene3D - 23 120 IPR036388 -
Prci5g1917 499 MobiDBLite consensus disorder prediction 1 29 - -
Prci5g1917 499 Coils Coil 150 191 - -
Prci5g1917 499 MobiDBLite consensus disorder prediction 1 19 - -
Prci5g1917 499 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 24 335 IPR027725 -
Prci5g1917 499 MobiDBLite consensus disorder prediction 118 142 - -
Prci5g1917 499 MobiDBLite consensus disorder prediction 128 142 - -
Prci5g1917 499 SMART hsfneu3 26 119 IPR000232 GO:0003700|GO:0006355|GO:0043565
Prci5g1917 499 SUPERFAMILY "Winged helix" DNA-binding domain 26 119 IPR036390 -
Prci5g1917 499 FunFam Heat shock transcription factor 1 23 120 - -
Prci5g1917 499 MobiDBLite consensus disorder prediction 302 348 - -
Prci5g1917 499 ProSitePatterns HSF-type DNA-binding domain signature. 69 93 IPR000232 GO:0003700|GO:0006355|GO:0043565
Prci5g1917 499 Pfam HSF-type DNA-binding 30 119 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g1917 Prci-Chr5 37211759 37219075 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g1917 2 496 HSF AT1G32330 54.102 2.61e-174 497
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Prci5g1917 HSF_DNA-bind 4.1e-33 CL0123