Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1915 ATGGATGCTAAGCACGGAAACAAGGAAGCAGCTGATCCTCAGCTCAAAAAGCAGCAGCAAAAAGTTCCCTTTCTAAAGCTCTTCTCCTTCGCCGACTTGTATGATTGTCTTCTCATGGCTGTTGGATCTGTTGGCGCTTGTATTCACGGCGCTTCTGTTCCTGTTTTCTTTATCTTTTTCGGAAAGTTGATCAACATCATCGGCCTCGCTTATCTTTTCCCTAAAGAAGCTTCTCACAAAGTTGCTCAGTATTCATTGGATTTCGTGTACCTGAGTGTGGCAATTCTATTTTCTTCTTGGACAGAGGTGGCTTGTTGGATGTACACAGGAGAAAGACAAGCAGCGAAGATGAGAATGGCGTATTTAAGGTCAATGCTGAGCCAAGATATAAGTCTGTTTGACACAGAGGCTTCAACAGGAGAGGTCATTTCTGCCATAACCAGTGACATTATTGTGGTTCAAGATGCACTATCTGAGAAGGTAGGGAATTTCATCCACTACATAAGCAGATTTATATCGGGATTTATTATCGGATTTGTCAGAGTGTGGCAGATTAGTTTAGTGACACTTTCAATTGTGCCCTTAATTGCCCTCGCCGGAGTTCTCTATGCTTACGTCACTGTTGGGCTTATCGCCAAAGCTCGAAAATCCTACGTGAGAGCTGGTGAAATCGCTGAAGAAGTGATAGGCAATGTTAGAACTGTACAGGCATTTGCAGGAGAAGAGAGAGCAGTAAGATCATACAAAATGGCTCTAATGAACACTTACAAGAATGGTCGAAAAGCAGGATTGGCCAAGGGTTTAGGACTTGGCTCCATGCATTGTGTTCTTTTTTTGTCATGGTCCCTGCTTGTTTGGTTCACTAGCGTCGTTGTTCACAAGAATATCACCAATGGTGGAGAGTCTTTCACTACCATGCTCAACGTTGTTGTCGCTGGCCTGTCACTTGGACTGGCAGCACCAGATATCACTGCATTTGTACGAGCAAAGGCAGCCGCTTATCCCATTTTTCAGATGATAGAGAGGGACACAGTGAGCAAAATCAGCTCAAAAACGGGTTACAAATTGAGCAAAGTAGAGGGTCACATTCAATTTAAAGGCGTTTGCTTCAGTTACCCATCTCGCCCTGAAGTAGTTATCTTCAACAATCTTAATATTGACATTCCTTCAGGGAAAGTTGTAGCGCTTGTTGGGGGAAGTGGTTCTGGAAAGAGCACCATTATATCGCTGATTGAACGCTTCTATGAACCCTTTTCTGGACAAATTCTGTTAGATGGGAACAACATTACGGAACTTGATCTCAAATGGCTGAGGCAACAAATTGGGTTGGTTAATCAAGAACCGGCCCTTTTTGCTACAAGTATCAGGGAGAACATACTGTATGGAAAAGATGATGCCACTCTTGAAGAACTACAACGATCTGTGAAGCTTTCAGATGCTCAGTCTTTCATTAGCAATCTTCCTGATAGATTAGAAACTCAGGTTGGTGAGAGAGGGATACAACTATCAGGTGGACAAAAGCAAAGGATTGCAATATCTCGTGCTTTAGTGAAGAATCCATCAATACTTTTATTGGATGAAGCAACCAGTGCTCTGGATGCAGAGTCTGAGAAGAGTGTGCAGGAGGCTCTTGATCGTGTTATGGTAGGTCGAACAACTGTGATAGTAGCACACAGACTTTCTACAATCAGGAATGCAGATGTGATTGCTGTTGTTCAAGGAGGGAGGATTGTTGAAACGGGCAGCCATGATGAGCTCATTGCCAATGCGAATAGTGCATATGCATCTCTTGTTCAACTCCAAGAGGCAGGTTCTTTGCAAAGACCCCCTTCGGTGGATCCAAGCATGGGACAACAATCAAGCATAAGGTACTCAAGAGAATTATCCCGTACAACGACAAGCTTAGGTGGTAGTTTTCGATCAGAGAAAGAATCTATTAGCCGTGTTGATGCTGATGAAGTGGAAACTAGTGGCAAGACAGGGCATGTTTCTTCAAAAAGATTATACTCCATGATTGGACCTGATTGGTACTATGGGGTTATAGGGACCTTTTGTGCATTTATTGCTGGAGCCCAGATGCCTCTTTTTGCTCTAGGAATATCTCATGCTCTGGTATCATATTACATGGACTGGGATACTACCTGTCGTGAGGTAAAGAAAATTGCTTTCCTCTTTTGTGGGGCAGCAGTTTTAACCGTCATTGTCCACGCCATCGAGCACCTTTGTTTTGGAATCATGGGCGAGCGACTTACTCTTCGTGTCCGAGAAACTTTGTTTTCTGCTATTTTGAAGAATGAAATTGGGTGGTTCGACGATACAGAAAACACCAGTTCCATGCTTTCATCACGTCTAGAGACTGATGCAACTTTGTTACGAACTATAGTTGTTGATCGGTCTGCAATTCTCTTGCAGAATGTTGGTCTGGTCGTTGCTTCATTTATCATTGCCTTCTTGTTGAACTGGAGAATAACGCTTGTTGTCGTGGCCACATATCCTTTGGTCATTAGTGGTCACATTAGTGAGAAACTTTTCTTTCAAGGATACGGTGGCAACTTGAGCAAAGCATATCTGAAAGCCAACATGCTGGCTGGGGAGGCCGCATATTCTATGGCATTACCCAGTTCTTTATTTTCTCATCTTATGGCCTTGCCTTGTGGTATGGTTCCGTACTGA 2673 0.434 MDAKHGNKEAADPQLKKQQQKVPFLKLFSFADLYDCLLMAVGSVGACIHGASVPVFFIFFGKLINIIGLAYLFPKEASHKVAQYSLDFVYLSVAILFSSWTEVACWMYTGERQAAKMRMAYLRSMLSQDISLFDTEASTGEVISAITSDIIVVQDALSEKVGNFIHYISRFISGFIIGFVRVWQISLVTLSIVPLIALAGVLYAYVTVGLIAKARKSYVRAGEIAEEVIGNVRTVQAFAGEERAVRSYKMALMNTYKNGRKAGLAKGLGLGSMHCVLFLSWSLLVWFTSVVVHKNITNGGESFTTMLNVVVAGLSLGLAAPDITAFVRAKAAAYPIFQMIERDTVSKISSKTGYKLSKVEGHIQFKGVCFSYPSRPEVVIFNNLNIDIPSGKVVALVGGSGSGKSTIISLIERFYEPFSGQILLDGNNITELDLKWLRQQIGLVNQEPALFATSIRENILYGKDDATLEELQRSVKLSDAQSFISNLPDRLETQVGERGIQLSGGQKQRIAISRALVKNPSILLLDEATSALDAESEKSVQEALDRVMVGRTTVIVAHRLSTIRNADVIAVVQGGRIVETGSHDELIANANSAYASLVQLQEAGSLQRPPSVDPSMGQQSSIRYSRELSRTTTSLGGSFRSEKESISRVDADEVETSGKTGHVSSKRLYSMIGPDWYYGVIGTFCAFIAGAQMPLFALGISHALVSYYMDWDTTCREVKKIAFLFCGAAVLTVIVHAIEHLCFGIMGERLTLRVRETLFSAILKNEIGWFDDTENTSSMLSSRLETDATLLRTIVVDRSAILLQNVGLVVASFIIAFLLNWRITLVVVATYPLVISGHISEKLFFQGYGGNLSKAYLKANMLAGEAAYSMALPSSLFSHLMALPCGMVPY 890
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1915 890 SMART AAA_5 390 576 IPR003593 GO:0016887
Prci5g1915 890 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 354 601 IPR027417 -
Prci5g1915 890 CDD ABC_6TM_Pgp_ABCB1_D1_like 39 336 - -
Prci5g1915 890 SUPERFAMILY ABC transporter transmembrane region 26 333 IPR036640 GO:0005524|GO:0016020
Prci5g1915 890 Gene3D ABC transporter type 1, transmembrane domain 26 868 IPR036640 GO:0005524|GO:0016020
Prci5g1915 890 Pfam ABC transporter 382 530 IPR003439 GO:0005524
Prci5g1915 890 CDD ABC_MTABC3_MDL1_MDL2 363 601 - -
Prci5g1915 890 MobiDBLite consensus disorder prediction 605 628 - -
Prci5g1915 890 CDD ABC_6TM_Pgp_ABCB1_D2_like 669 866 - -
Prci5g1915 890 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 363 599 IPR003439 GO:0005524
Prci5g1915 890 PANTHER ABC TRANSPORTER B FAMILY 7 604 IPR039421 -
Prci5g1915 890 FunFam ABC transporter B family member 19 353 602 - -
Prci5g1915 890 FunFam ABC transporter B family member 1 26 362 - -
Prci5g1915 890 Gene3D - 353 602 IPR027417 -
Prci5g1915 890 Pfam ABC transporter transmembrane region 681 863 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci5g1915 890 Pfam ABC transporter transmembrane region 44 311 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci5g1915 890 SUPERFAMILY ABC transporter transmembrane region 666 866 IPR036640 GO:0005524|GO:0016020
Prci5g1915 890 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 40 328 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci5g1915 890 ProSitePatterns ABC transporters family signature. 502 516 IPR017871 GO:0005524|GO:0016887
Prci5g1915 890 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 680 835 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g1915 Prci-Chr5 37167342 37174598 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g1915 16 866 Calmodulin-binding Proteins AT2G36910 46.613 0.0 763
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g1915 K05658 - gmx:100819045 1447.57