Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1887 ATGGGGGACGTGGCTAAGGACCTCACTGCAGGAACTGTTGGAGGGGCAGCACAATTGATATGCGGACACCCATTTGACACCATCAAAGTCAAGCTCCAAAGCCAGCCTGCACCAGCCCCTGGCCAACCTCTCAAGTATGCTGGCGCCATTGATGCGGTCAAGCAAACACTAGCAGCTGAAGGCCCAAGGGGTCTGTACAAAGGCATGGGCGCTCCACTTGCAACAGTGGCAGCTTTCAATGCTGTCCTATTCACAGTAAGGGGACAGATGGAGGCATTATTGAGATCACATCCTGGTGCCCCTCTTACAGTGAACCAGCAGGTTGTTTGTGGAGCTGGGGCTGGAGTCGCCGTTTCCTTTCTAGCTTGCCCCACTGAGCTAATCAAATGCAGGCTGCAAGCGCAAAGTGCGCTGGCAGGTTCTGGAACAGCTACGGTAGCTGTGAAGTATGGAGGCCCCATGGATGTGGCCCGGCATGTTCTCAGGTCAGAAGGGGGCGCGAAAGGTCTTTTTAAGGGCTTGGTTCCGACAATGGCTCGTGAAATACCTGGAAACGCTGCAATGTTTGGTGTATATGAAGCAGTAAAGCAGTTAATTGCTGGAGGCCAGGATACCTCTGGACTTGGTAGAGGTTCTTTGATAGTTGCTGGAGGCTTGGCAGGAGCTTCCTTCTGGTTCATGGTGTACCCGACTGATGTTGTAAAGAGTGTGATTCAGGTTGATGATTACAAAAATCCCAAGTATTCTGGTTCATGGGATGCCTTTAGAAAGATTAAAGCTTCAGAGGGATTTAAAGGCCTTTACAAGGGTTTCGGTCCTGCAATGGCGCGAAGCGTTCCTGCAAATGCAGCTTGCTTCTTAGCGTATGAGGTGACAAGATCAGCTCTGGGGTGA 894 0.5134 MGDVAKDLTAGTVGGAAQLICGHPFDTIKVKLQSQPAPAPGQPLKYAGAIDAVKQTLAAEGPRGLYKGMGAPLATVAAFNAVLFTVRGQMEALLRSHPGAPLTVNQQVVCGAGAGVAVSFLACPTELIKCRLQAQSALAGSGTATVAVKYGGPMDVARHVLRSEGGAKGLFKGLVPTMAREIPGNAAMFGVYEAVKQLIAGGQDTSGLGRGSLIVAGGLAGASFWFMVYPTDVVKSVIQVDDYKNPKYSGSWDAFRKIKASEGFKGLYKGFGPAMARSVPANAACFLAYEVTRSALG 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1887 297 ProSiteProfiles Solute carrier (Solcar) repeat profile. 2 93 IPR018108 -
Prci5g1887 297 Gene3D Mitochondrial carrier domain 99 297 IPR023395 -
Prci5g1887 297 ProSiteProfiles Solute carrier (Solcar) repeat profile. 208 295 IPR018108 -
Prci5g1887 297 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 4 296 - -
Prci5g1887 297 Pfam Mitochondrial carrier protein 214 296 IPR018108 -
Prci5g1887 297 Pfam Mitochondrial carrier protein 4 95 IPR018108 -
Prci5g1887 297 Pfam Mitochondrial carrier protein 102 200 IPR018108 -
Prci5g1887 297 SUPERFAMILY Mitochondrial carrier 3 290 IPR023395 -
Prci5g1887 297 ProSiteProfiles Solute carrier (Solcar) repeat profile. 102 198 IPR018108 -
Prci5g1887 297 FunFam mitochondrial carnitine/acylcarnitine carrier-like protein 2 296 - -
Prci5g1887 297 Gene3D Mitochondrial carrier domain 2 98 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g1887 Prci-Chr5 36901575 36905456 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g1887 22 296 Antiporters AT1G79900 35.461 1.06e-41 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g1887 K15109 - jre:108984095 523.087