Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1873 ATGGAGATATTGGATATTTGGATATTCAGACTTGTTCTGGTATATACCTTTTGCATTTTTGTGTTCGTCAGATCATCTTCTGCAACTGAAGGATTTGTAAGCATAGCTTGTTGTGCTGATTCAAGTTATACAGATCCTGAGACCAACTTGAGTTACAAATCAGATTACACTTGGTTTCCAGATAGAACAAGCTGCAGAAGCTTGATCAATCATAAGGCAAACCAAACAGGCAACGAAAGAGCAAGAATGTTTGATATTACAGATAAGGGAAAGAGATGTTACAGCTTGCCAACAATTCAGGACAAAATCTATATGTTAAGGGGCTCATTTCCACCAGACAATTCACTTGAGGATTTTTCCTTTAATGTGTTAATTGCAGTAACATCATTAGGTTCAGTGAGACCATCCGGGGACTTGGAAATAGTTGAGGGAATTTTCAGGGCTTCTAAGAACTCCATAGACTTTTGCTTAGTGAAGGAGAAGCAGGAAAATGGGCATCCTTATATTTCACAGATCGAGTTAAGGCCTGTGCATGAAGAGTATCTGCAGGATTTACATTCTAGTGTTGTAAAACTAGTCAGTAGAAATAATCCAGGGGGCACAGTAAGTGACATCAGGTACCCAGTAGACCTAAATGACCGAATCTGGAAAGAAACTTCAAGTTCATCAGCATCTCCCATATCATCATTCAATGCCAGCATTTCTGGCCAAATTGCTAATGTGACTCCTCCTCTTCAAGTTTTACAAACTGCTCTTACTCATTCTGAGAGATTGGAGTTCATTCAATATGTCTCAGAGACATGGAACCACGACTACCACGTGCTCCTCTACTTCCTTGAATTAAATGACACTGTTAGGTCAGGCCAAAGAGTGTTCGACATCTATCTTAATGGTGACCTTAAGGAGAAGAGTTTTGATATATTGGCTGGAGGCTCCAACTATAGACACAAAATGCTGAACGTTTCATCAAATGGGGCAATCAATTTAACCTTGGCCAAAGCATCTAGTTCTGAGTATGGACCTCTTTGTAATGCATATGAAATTCTGGAGGTACTTCCATGGATGAAAGAGACCAATCAAACCGACTTGCAAGGAATGCTGAAGATGTCAGAAGAGTTGACGATGCAAAACCAAGGCAATAAAGTGCTAGAGAGTTGGAGTGGAGACCCATGCATGCCTTTTCCTTGGAATGGAGTAGAATGTGATCTTTTGAATGATTCAACTGTTATCAATAAGCTGGATCTTTCTTCAAGTAACTTCAGAGGAACAATCCCTTCAGGGATCACTGTGTTGACCAACTTAGAAACACTGAACCTGAGTCACAACAACTTCAATGGCAGTGTCCCTTCATTTCCACCTTCCTCTTCACTGATATCACTAGATCTGAGCTACAATGATCTCACGGGATCGCTTCAGGGATCAATTGCCTCACTGGCACATCTGAAATCCTTATATTTCGGCTGCAATCCTGACATGAGCAAGGAAGTTCCTTCAAACTTCAGCAGTTCACTCGATACAGATTATGGAAGATGCAATTATAAAAGACCAAGAATTTCAGCACCACTTATCATTGGAACCGTTACATGTGGGTCGGTCTTGCTTACTTTGGCTCTTGGATTTATTTTTGTTTGCCACTGCAAGAAAACCTTAATTCCCCGGGGAGGATTTGATGAAAAGAAATACCCGAACCCAATGGCAACAAATATAATCTTCTCTTTGCCCAGTAAAGACGATTTCTTCTTAAAGTCAGTATGTATACAAAAGTTTACCCTGGATTATATAGAGGCAGCCACCGAGAAGTACAAAACTTTGATAGGTGAAGGAGGATTTGGCTGTGTTTACAGGGGCATTCTAGATGATGGTCAAGAAGTGGCAGTGAAAGTTCGGTCAGCCACATCAACTCAGGGAACTAAAGAATTTGACAATGAGCTAAATCTACTTTCTGAGATACAGCATGAAAACCTGGTGCCTCTTCTTGGTTACTGTAGTGAAAATGATCAACAAATTCTGGTATATCCGTTTATGTCCAATGGCTCTTTACAGGATAGACTTTATGGAGAACCAGCGAAGAGAAAAGTATTAGACTGGCCAACCAGACTTTCTGTTGCTCTGGGTGCAGCTCGAGGTTTGGCATATCTTCATACATTCCCGGGGCGTTCCATTATACATAGGGATGTAAAATCGAGCAATATACTTCTGGATCATAGCATGACAGCTAAAGTAGCAGATTTTGGTTTCTCAAAATATGCTCCCCAGGAAGGAGACATCGGTGCTTCTCTTGAACTAAGAGGAACTGCAGGATATCTGGATCCCGAGTACTATACTACCCAGCAGTTATCTGCAAAAAGTGATGTCTTCAGCTTTGGCGTGGTTCTACTTGAAATTGTGAGTGGTCGGGAACCTCTCAACATCCACAGGCCACGCAATGAGTGGAGCCTAGTCGAATGGGCTAAACCATATATAAGAGCAGCAAAAATTGATGAAATTGTGGATCCTGGCATAAAAGGAGGATATCATGCAGAGGCAATGTGGAGAGTGGTGGAAGTAGCACACTCATGTGTTGAAACCTTCTCAAGATTTAGACCTGAGATGGAGGACGTTGTAAGAGAATTGGAGGATGCTCTGATTATAGAAAACAATGCATCGGAATACATGAGGTCCATAGAGAGCCTAGGAGGGTCCAATCGCTACTCCATTGTAATAGAGAAAAGGGTGGTACCCCCATCTTCCTCTACAACAGAATCAACAATCATAAACCAAACCTTGTCCTTCCCACAGCCCAGATAG 2787 0.4151 MEILDIWIFRLVLVYTFCIFVFVRSSSATEGFVSIACCADSSYTDPETNLSYKSDYTWFPDRTSCRSLINHKANQTGNERARMFDITDKGKRCYSLPTIQDKIYMLRGSFPPDNSLEDFSFNVLIAVTSLGSVRPSGDLEIVEGIFRASKNSIDFCLVKEKQENGHPYISQIELRPVHEEYLQDLHSSVVKLVSRNNPGGTVSDIRYPVDLNDRIWKETSSSSASPISSFNASISGQIANVTPPLQVLQTALTHSERLEFIQYVSETWNHDYHVLLYFLELNDTVRSGQRVFDIYLNGDLKEKSFDILAGGSNYRHKMLNVSSNGAINLTLAKASSSEYGPLCNAYEILEVLPWMKETNQTDLQGMLKMSEELTMQNQGNKVLESWSGDPCMPFPWNGVECDLLNDSTVINKLDLSSSNFRGTIPSGITVLTNLETLNLSHNNFNGSVPSFPPSSSLISLDLSYNDLTGSLQGSIASLAHLKSLYFGCNPDMSKEVPSNFSSSLDTDYGRCNYKRPRISAPLIIGTVTCGSVLLTLALGFIFVCHCKKTLIPRGGFDEKKYPNPMATNIIFSLPSKDDFFLKSVCIQKFTLDYIEAATEKYKTLIGEGGFGCVYRGILDDGQEVAVKVRSATSTQGTKEFDNELNLLSEIQHENLVPLLGYCSENDQQILVYPFMSNGSLQDRLYGEPAKRKVLDWPTRLSVALGAARGLAYLHTFPGRSIIHRDVKSSNILLDHSMTAKVADFGFSKYAPQEGDIGASLELRGTAGYLDPEYYTTQQLSAKSDVFSFGVVLLEIVSGREPLNIHRPRNEWSLVEWAKPYIRAAKIDEIVDPGIKGGYHAEAMWRVVEVAHSCVETFSRFRPEMEDVVRELEDALIIENNASEYMRSIESLGGSNRYSIVIEKRVVPPSSSTTESTIINQTLSFPQPR 928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1873 928 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 675 884 - -
Prci5g1873 928 Pfam Malectin-like domain 39 350 IPR024788 -
Prci5g1873 928 Pfam Protein tyrosine and serine/threonine kinase 602 871 IPR001245 GO:0004672|GO:0006468
Prci5g1873 928 SMART serkin_6 599 876 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g1873 928 ProSiteProfiles Leucine-rich repeat profile. 433 455 IPR001611 GO:0005515
Prci5g1873 928 CDD STKc_IRAK 605 872 - -
Prci5g1873 928 SUPERFAMILY Protein kinase-like (PK-like) 580 871 IPR011009 -
Prci5g1873 928 ProSitePatterns Serine/Threonine protein kinases active-site signature. 721 733 IPR008271 GO:0004672|GO:0006468
Prci5g1873 928 FunFam Nodulation receptor kinase 568 674 - -
Prci5g1873 928 Gene3D Ribonuclease Inhibitor 359 513 IPR032675 -
Prci5g1873 928 Gene3D Transferase(Phosphotransferase) domain 1 675 887 - -
Prci5g1873 928 Gene3D Phosphorylase Kinase; domain 1 573 674 - -
Prci5g1873 928 ProSiteProfiles Protein kinase domain profile. 599 876 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g1873 928 PANTHER OS07G0107800 PROTEIN-RELATED 33 875 - -
Prci5g1873 928 SUPERFAMILY L domain-like 382 501 - -
Prci5g1873 928 ProSitePatterns Protein kinases ATP-binding region signature. 605 627 IPR017441 GO:0005524
Prci5g1873 928 Gene3D - 191 351 - -
Prci5g1873 928 Pfam Leucine rich repeat N-terminal domain 360 402 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g1873 Prci-Chr5 36718277 36726809 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g1873 18 878 Receptor kinase-like Gene Family AT1G67720 33.595 5.82e-128 407
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Prci5g1873 Malectin_like 1.9e-48 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g1873 - - pcin:129311567 1821.98