Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1872 ATGGAGATATTGGATATTTGGATATTCAGACTTGTTCTGGTATATACCTTTTGCATTTTTGTGTTCGTCAGATCATCTTCTGCAACTGAAGGATTTGTAAGCATAGCTTGTTGTGCTGATTCAAGTTATACAGATCCTGAGACCAACTTGAGTTACAAATCAGATTACACTTGGTTTCCAGATAGAACAAGCTGCAGAAGCTTGATCAATCATAAGGCAAACCAAACAGGCAACGAAAGAGCAAGAATGTTTGATATTACAGATAAGGGAAAGAGATGTTACAGCTTGCCAACAATTCAGGACAAAATCTATATGTTAAGGGGCTCATTTCCACCAGACAATTCACTTGAGGATTTTTCCTTTAATGTGTTAATTGCAGTAACATCATTAGGTTCAGTGAGACCATCCGGGGACTTGGAAATAGTTGAGGGAATTTTCAGGGCTTCTAAGAACTCCATAGACTTTTGCTTAGTGAAGGAGAAGCAGGAAAATGGGCATCCTTATATTTCACAGATCGAGTTAAGGCCTGTGCATGAAGAGTATCTGCAGGATTTACATTCTAGTGTTGTAAAACTAGTCAGTAGAAATAATCCAGGGGGCACAGTAAGTGACATCAGGTACCCAGTAGACCTAAATGACCGAATCTGGAAAGAAACTTCAAGTTCATCAGCATCTCCCATATCATCATTCAATGCCAGCATTTCTGGCCAAATTGCTAATGTGACTCCTCCTCTTCAAGTTTTACAAACTGCTCTTACTCATTCTGAGAGATTGGAGTTCATTCAATATGTCTCAGAGACATGGAACCACGACTACCACGTGCTCCTCTACTTCCTTGAATTAAATGACACTGTTAGGTCAGGCCAAAGAGTGTTCGACATCTATCTTAATGGTGACCTTAAGGAGAAGAGTTTTGATATATTGGCTGGAGGCTCCAACTATAGACACAAAATGCTGAACGTTTCATCAAATGGGGCAATCAATTTAACCTTGGCCAAAGCATCTAGTTCTGAGTATGGACCTCTTTGTAATGCATATGAAATTCTGGAGGTACTTCCATGGATGAAAGAGACCAATCAAACCGACTTGCAAGGAATGCTGAAGATGTCAGAAGAGTTGACGATGCAAAACCAAGGCAATAAAGTGCTAGAGAGTTGGAGTGGAGACCCATGCATGCCTTTTCCTTGGAATGGAGTAGAATGTGATCTTTTGAATGATTCAACTGTTATCAATAAGCTGGATCTTTCTTCAAGTAACTTCAGAGGAACAATCCCTTCAGGGATCACTGTGTTGACCAACTTAGAAACACTGAACCTGAGTCACAACAACTTCAATGGCAGTGTCCCTTCATTTCCACCTTCCTCTTCACTGATATCACTAGATCTGAGCTACAATGATCTCACGGGATCGCTTCAGGGATCAATTGCCTCACTGGCACATCTGAAATCCTTATATTTCGGCTGCAATCCTGACATGAGCAAGGAAGTTCCTTCAAACTTCAGCAGTTCACTCGATACAGATTATGGAAGATGCAATTATAAAAGACCAAGAATTTCAGCACCACTTATCATTGGAACCGTTACATGTGGGTCGGTCTTGCTTACTTTGGCTCTTGGATTTATTTTTGTTTGCCACTGCAAGAAAACCTTAATTCCCCGGGGAGGATTTGATGAAAAGAAATACCCGAACCCAATGGCAACAAATATAATCTTCTCTTTGCCCAGTAAAGACGATTTCTTCTTAAAGGGCATTCTAGATGATGGTCAAGAAGTGGCAGTGAAAGTTCGGTCAGCCACATCAACTCAGGGAACTAAAGAATTTGACAATGAGCTAAATCTACTTTCTGAGATACAGCATGAAAACCTGGTGCCTCTTCTTGGTTACTGTAGTGAAAATGATCAACAAATTCTGGTATATCCGTTTATGTCCAATGGCTCTTTACAGGATAGACTTTATGGAGAACCAGCGAAGAGAAAAGTATTAGACTGGCCAACCAGACTTTCTGTTGCTCTGGGTGCAGCTCGAGGTTTGGCATATCTTCATACATTCCCGGGGCGTTCCATTATACATAGGGATGTAAAATCGAGCAATATACTTCTGGATCATAGCATGACAGCTAAAGTAGCAGATTTTGGTTTCTCAAAATATGCTCCCCAGGAAGGAGACATCGGTGCTTCTCTTGAACTAAGAGGAACTGCAGGATATCTGGATCCCGAGTACTATACTACCCAGCAGTTATCTGCAAAAAGTGATGTCTTCAGCTTTGGCGTGGTTCTACTTGAAATTGTGAGTGGTCGGGAACCTCTCAACATCCACAGGCCACGCAATGAGTGGAGCCTAGTCGAATGGGCTAAACCATATATAAGAGCAGCAAAAATTGATGAAATTGTGGATCCTGGCATAAAAGGAGGATATCATGCAGAGGCAATGTGGAGAGTGGTGGAAGTAGCACACTCATGTGTTGAAACCTTCTCAAGATTTAGACCTGAGATGGAGGACGTTGTAAGAGAATTGGAGGATGCTCTGATTATAGAAAACAATGCATCGGAATACATGAGGTCCATAGAGAGCCTAGGAGGGTCCAATCGCTACTCCATTGTAATAGAGAAAAGGGTGGTACCCCCATCTTCCTCTACAACAGAATCAACAATCATAAACCAAACCTTGTCCTTCCCACAGCCCAGATAG 2688 0.4156 MEILDIWIFRLVLVYTFCIFVFVRSSSATEGFVSIACCADSSYTDPETNLSYKSDYTWFPDRTSCRSLINHKANQTGNERARMFDITDKGKRCYSLPTIQDKIYMLRGSFPPDNSLEDFSFNVLIAVTSLGSVRPSGDLEIVEGIFRASKNSIDFCLVKEKQENGHPYISQIELRPVHEEYLQDLHSSVVKLVSRNNPGGTVSDIRYPVDLNDRIWKETSSSSASPISSFNASISGQIANVTPPLQVLQTALTHSERLEFIQYVSETWNHDYHVLLYFLELNDTVRSGQRVFDIYLNGDLKEKSFDILAGGSNYRHKMLNVSSNGAINLTLAKASSSEYGPLCNAYEILEVLPWMKETNQTDLQGMLKMSEELTMQNQGNKVLESWSGDPCMPFPWNGVECDLLNDSTVINKLDLSSSNFRGTIPSGITVLTNLETLNLSHNNFNGSVPSFPPSSSLISLDLSYNDLTGSLQGSIASLAHLKSLYFGCNPDMSKEVPSNFSSSLDTDYGRCNYKRPRISAPLIIGTVTCGSVLLTLALGFIFVCHCKKTLIPRGGFDEKKYPNPMATNIIFSLPSKDDFFLKGILDDGQEVAVKVRSATSTQGTKEFDNELNLLSEIQHENLVPLLGYCSENDQQILVYPFMSNGSLQDRLYGEPAKRKVLDWPTRLSVALGAARGLAYLHTFPGRSIIHRDVKSSNILLDHSMTAKVADFGFSKYAPQEGDIGASLELRGTAGYLDPEYYTTQQLSAKSDVFSFGVVLLEIVSGREPLNIHRPRNEWSLVEWAKPYIRAAKIDEIVDPGIKGGYHAEAMWRVVEVAHSCVETFSRFRPEMEDVVRELEDALIIENNASEYMRSIESLGGSNRYSIVIEKRVVPPSSSTTESTIINQTLSFPQPR 895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1872 895 PANTHER OS07G0107800 PROTEIN-RELATED 33 842 - -
Prci5g1872 895 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 642 851 - -
Prci5g1872 895 Gene3D Phosphorylase Kinase; domain 1 580 642 - -
Prci5g1872 895 Gene3D Ribonuclease Inhibitor 359 513 IPR032675 -
Prci5g1872 895 Gene3D - 191 351 - -
Prci5g1872 895 Pfam Malectin-like domain 39 350 IPR024788 -
Prci5g1872 895 ProSitePatterns Serine/Threonine protein kinases active-site signature. 688 700 IPR008271 GO:0004672|GO:0006468
Prci5g1872 895 ProSiteProfiles Leucine-rich repeat profile. 433 455 IPR001611 GO:0005515
Prci5g1872 895 CDD STKc_IRAK 582 839 - -
Prci5g1872 895 Gene3D Transferase(Phosphotransferase) domain 1 643 854 - -
Prci5g1872 895 SUPERFAMILY Protein kinase-like (PK-like) 582 838 IPR011009 -
Prci5g1872 895 SMART serkin_6 579 843 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g1872 895 Pfam Protein tyrosine and serine/threonine kinase 588 838 IPR001245 GO:0004672|GO:0006468
Prci5g1872 895 SUPERFAMILY L domain-like 382 501 - -
Prci5g1872 895 ProSiteProfiles Protein kinase domain profile. 545 843 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g1872 895 Pfam Leucine rich repeat N-terminal domain 360 402 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g1872 Prci-Chr5 36718277 36726810 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g1872 18 845 Receptor kinase-like Gene Family AT1G67720 33.145 3.38e-119 383
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Prci5g1872 Malectin_like 1.8e-48 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g1872 - - pcin:129311567 1737.24