Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1867 ATGGCCGATACTTACTGCTATCCTCATCCTTATCTTCTTCCTCTGCTACTCTCCTTCCTCTCCTCGGCCTTCTTCGTTGATTCACTTTACATTAAGAAGTCTGGATTCGGCTCTACTGATGCCGACATACTCTACTTGGGATCTGCAGGATCTCGGGCTGGTGCTGTTCCATTCAACATGAATGACAAATATACTTGTCAAGTAGGATGGGTCATCTATGCCAGAAGGGTCAAACTTTGGGACTCAAATACTGGACGCATCGCTGACTTCACCTCTCACTACTCCTTCACTATAGACACTCAAGGCCTATATAACACCACAACAGGTCTATCACCCGAGAGCCAGATTGTTCACGTGGAGTTTGACTCTTACGCAAACACTGAATGGGGTGAGACAACGGAACATGTGGGAATCAACAACAATACTGTTGTTTCATCAGTATCTACGTATTGGAATGCTACTCTGCACAGTGATGACCCTGCAGACGTGTGGATTACCTACAACTCTACGTCGAAAAACTTGAGTGTATCGTGGAAATACCAGAAGACACATAGTCCTCGAGAGAACACTAGTCTTTCTTATCTAATTGATTTATCCAAGGCACTGCCTGAATGGGTTACAGTTGGATTTTCTGCAGCAACTGGAGCGTATGGAGAACTTAATACTCTTCTCTCTTGGGAGTTCAACTCAACTTTGGATGACACAGAACAGAACGAAAACAAGACAACACTTCCGGTGATTCTGAGTACCGTTTTAGGAAGTGTTGTTTTGATTGTTGGAGGAGCAATTGTAGCATATGCATTACTTTGGAGGAGGAAGAAAACGAGAATAAAAAAGGAAGAAGGTGTGAACTTGACATCGATGGATGATGACCTTGAAAGAGGAGCAGGACCGAGGAGGTTCTCCCGCAGAGAGCTCACTAAAGCTACCAACAATTTCTCTGAAGATAGGAAACTGGGTCAAGGTGGGTTTGGAGCTGTTTACCGAGGTTATTTTCCTGACATAGATTTAACAGTTGCAGTGAAGAAGATATCAAGAGGATCAAGGCAAGGGAAAAGAGAGTACGTAACTGAGGTCAGGGTCATTAGTCAGCTAAGACACAGGAATCTTGTGCAGCTCATCGGTTGGTGTCATGAAGGAGGCGAGTTCCTACTTGTTTATGAGTTCATGCCAAATGGCAGCCTTGATGCTCACTTGTCAGGGAAGAAGCCTCCTCTTCCATGGAACGTGAGGCACAGGATAGCGTTGGGATTGGCCTCAGGAATTCTCTACCTTCATGAAGAATGGCAGCAGTGTGTGGTTCACAGAGATATCAAATCCAGCAATATAATGCTAGATTCCAGTTTCAATGTAAAACTCGGAGACTTTGGGCTGGCCAAGCTCATGGAACACGATTTGGGACCCCAGACAACAGGATTGGCAGGCACCGTAGGCTATATGGCTCCAGAATATGTGAGTACAGGTAGGGCTAGTAAGGAGTCAGATATCTATAGTTTTGGAGTAGTTGCTTTAGAAATTGCCACAGGAAGAAAGGCAAATGATCTTATGACAGATGGATATGGAGAAATAGGATTGATTGAGTGGGTCTGGGATCATTATGGAAGAGGAGAGCTAGCTTTGGCCATGGATAAAAATTTTCAAAAGGACTATAATGAGAGAGAAGTGGAGTGTCTTATGACTGTAGGGTTGTGGTGTGTCCACCCAGATAAAAATTTGAGGCCATCAATTAGACAAGCAATTCAGGTGTTATGTTTTGAGGTTGCCATGCCAGATCTTCCCCTGAAGAAGCCTGTTCCCATGTATTGTGGTCCCACATCAGAAATTACCTCTGAAGCAGCTTCCTTATCCTCAACCCTTCAAACAGGTCGTTAA 1872 0.4434 MADTYCYPHPYLLPLLLSFLSSAFFVDSLYIKKSGFGSTDADILYLGSAGSRAGAVPFNMNDKYTCQVGWVIYARRVKLWDSNTGRIADFTSHYSFTIDTQGLYNTTTGLSPESQIVHVEFDSYANTEWGETTEHVGINNNTVVSSVSTYWNATLHSDDPADVWITYNSTSKNLSVSWKYQKTHSPRENTSLSYLIDLSKALPEWVTVGFSAATGAYGELNTLLSWEFNSTLDDTEQNENKTTLPVILSTVLGSVVLIVGGAIVAYALLWRRKKTRIKKEEGVNLTSMDDDLERGAGPRRFSRRELTKATNNFSEDRKLGQGGFGAVYRGYFPDIDLTVAVKKISRGSRQGKREYVTEVRVISQLRHRNLVQLIGWCHEGGEFLLVYEFMPNGSLDAHLSGKKPPLPWNVRHRIALGLASGILYLHEEWQQCVVHRDIKSSNIMLDSSFNVKLGDFGLAKLMEHDLGPQTTGLAGTVGYMAPEYVSTGRASKESDIYSFGVVALEIATGRKANDLMTDGYGEIGLIEWVWDHYGRGELALAMDKNFQKDYNEREVECLMTVGLWCVHPDKNLRPSIRQAIQVLCFEVAMPDLPLKKPVPMYCGPTSEITSEAASLSSTLQTGR 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1867 623 Pfam Protein kinase domain 314 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g1867 623 FunFam L-type lectin-domain containing receptor kinase IX.1 298 389 - -
Prci5g1867 623 Pfam Legume lectin domain 34 99 IPR001220 GO:0030246
Prci5g1867 623 Pfam Legume lectin domain 102 241 IPR001220 GO:0030246
Prci5g1867 623 ProSitePatterns Legume lectins alpha-chain signature. 202 211 IPR000985 -
Prci5g1867 623 FunFam Lectin-domain containing receptor kinase A4.3 390 603 - -
Prci5g1867 623 SUPERFAMILY Concanavalin A-like lectins/glucanases 34 239 IPR013320 -
Prci5g1867 623 Gene3D Phosphorylase Kinase; domain 1 298 389 - -
Prci5g1867 623 Gene3D - 28 104 - -
Prci5g1867 623 CDD STKc_IRAK 319 584 - -
Prci5g1867 623 CDD lectin_legume_LecRK_Arcelin_ConA 34 232 IPR001220 GO:0030246
Prci5g1867 623 Gene3D Transferase(Phosphotransferase) domain 1 390 604 - -
Prci5g1867 623 SMART serkin_6 313 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g1867 623 PANTHER - 61 583 - -
Prci5g1867 623 ProSitePatterns Protein kinases ATP-binding region signature. 319 343 IPR017441 GO:0005524
Prci5g1867 623 Gene3D - 105 244 - -
Prci5g1867 623 ProSiteProfiles Protein kinase domain profile. 313 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g1867 623 SUPERFAMILY Protein kinase-like (PK-like) 297 607 IPR011009 -
Prci5g1867 623 ProSitePatterns Serine/Threonine protein kinases active-site signature. 433 445 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g1867 Prci-Chr5 36677044 36679169 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g1867 15 601 Receptor kinase-like Gene Family AT5G10530 54.167 0.0 660
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Prci5g1867 Pkinase 1.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g1867 - - qsa:O6P43_033286 796.193