Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1866 ATGACCAATACTCACTGCTATCCTCATCTTCTTCCCATGTTGCTGTCCTTCTTCTCCTTAGTCCTCTTTGTTGATTCAGTTTACATTCAAAGGTCTGGATTTGGATCTGATGATGCCGACATACTGTACCTGGGATCTGCAGGATCTCGAGCTGGTGCTGTTCAGTTCAACATGAATGCAAGGTATACTTGTCAAGTAGGATGGGCCATCTATGCCAGAAGGGTTAAACTTTGGGACTCAAATACTGGACGCGTCACTGACTTCACCTCTCACTATTCCTTCACTATAGACACTCAAGATAACATTAATTATGGCTATGGGCTATGCTTCTTCCTTGCTCCTTTTGGTTTTAAAATCCCTCCAAATTCTGCTAGTGGCTTTCTGGGCATATACAACGCCTCAACAGGTCTATCACGTGAGAGCCAGATTGTTCATGTGGAATTTGACTCTTACGCAAACGCTGAATGGGGCGAGACCATGACACATGTGGGAATCAACAATAATTCTGTTATTTCATCAGTATCTACGTATTGGAATACAACTCTACACAGCAATGATCCTGCAGACGTGTGGATTACCTACAACTCTACTTCGAAAAACTTTAGTGTATCGTGGAAATACCAGAACACGCATAGTCCTCAAGAGAACACTAGTCTTTCTTATCTAATTGATTTATCCAAGGCACTACCAGAATGGGTTACAGTTGGATTTTCTGCAGCAACGGGACCCTTTAAAGAACTCCATACTCTTCTCTCTTGGGAGTTCAACTCAACTTTGGATGACACAGAACAGAGTAAAAACAAGACTTCACTTACGGTGGTTCTGAGTACCGTTTTAGTGAGTGTTGTTTTGATAGTTGGAGGAGCAATTGTAGCGTATGCTTTACTCTGGAGAAAGAAGAAAACGAGAAGCAAAAAGGAAGATATGAACTTAACATCAATGAATGATGTCCTCGAAAGAGAAGCAGGACCGAGAAGGTTCTCTCGCAGAGAGCTTGCTAAAGCTACCAACAATTTCTCTGAAGATAGGAAACTGGGTCAAGGTGGGTTTGGCGCTGTTTACCGAGGTTATTTTCCTGACATAGATTTAACAGTTGCTGTGAAGAAGATATCAAGAGGATCAAGGCAAGGGAAAAGAGAGTACGTAACTGAGGTCAGGGTCATTAGTCAGCTAAGACACAGGAATCTTGTGCAGCTCATCGGTTGGTGTCATGAAAGAGGCGAGTTCCTACTTGTTTACGAGTTCATGCCAAATGGTAGCCTTGACGCTCATTTGTCAGGGAAGAAGCCTCCTCTTCCATGGAACGTGAGGCACAAGATAGCTCTGGGATTGGCCTCAGGAGTGCTCTACCTTCATGAAGAATGGCAACAATGTGTGGTTCACCGGGATGTCAAAACAAGTAATGTCATGCTAGATTCTAGTTTCAATGCAAAACTTGGAGACTTTGGGTTGGCTAAGCTTGTGGACCATGATTTGGGACCCCAAACAACAGGATTGGCAGGCACAATGGGTTATATGGCTCCAGAATATGTAAGTACAGGCAGGGCCAGCAAGGAATCAGATGTTTATAGTTTTGGAGTAGTTGCCTTAGAGATTGTTACAGGAAGAAAGGCAAATGATCTTATGAAGGATGGAGATGGGGTAATAGGATTGATTGAGTGGGTTTGGAATCATTATGGGAGGGGAGAGCTAGCTTTAGCCATGGATGAAAAGTTGCAGGAGGACTATAATAAGAGAGAAGTGGAGTATTTGATGATTGTGGGTTTGTGGTGTGCCCACCCAGATAAGAACATGAGGCCATCTATTAGGCAAGCAATTCAAGTGTTGTGTTTTGAGGTTGCCCTGCCCTATCTTCCTTCAAAGAGGCCTATTCCAATATATCATGCTCCCAAACCAAAAGTTATTTCTGAAATAACTTCTTTAACTACAACTTTACAAACTGGTCGTTGA 1950 0.4287 MTNTHCYPHLLPMLLSFFSLVLFVDSVYIQRSGFGSDDADILYLGSAGSRAGAVQFNMNARYTCQVGWAIYARRVKLWDSNTGRVTDFTSHYSFTIDTQDNINYGYGLCFFLAPFGFKIPPNSASGFLGIYNASTGLSRESQIVHVEFDSYANAEWGETMTHVGINNNSVISSVSTYWNTTLHSNDPADVWITYNSTSKNFSVSWKYQNTHSPQENTSLSYLIDLSKALPEWVTVGFSAATGPFKELHTLLSWEFNSTLDDTEQSKNKTSLTVVLSTVLVSVVLIVGGAIVAYALLWRKKKTRSKKEDMNLTSMNDVLEREAGPRRFSRRELAKATNNFSEDRKLGQGGFGAVYRGYFPDIDLTVAVKKISRGSRQGKREYVTEVRVISQLRHRNLVQLIGWCHERGEFLLVYEFMPNGSLDAHLSGKKPPLPWNVRHKIALGLASGVLYLHEEWQQCVVHRDVKTSNVMLDSSFNAKLGDFGLAKLVDHDLGPQTTGLAGTMGYMAPEYVSTGRASKESDVYSFGVVALEIVTGRKANDLMKDGDGVIGLIEWVWNHYGRGELALAMDEKLQEDYNKREVEYLMIVGLWCAHPDKNMRPSIRQAIQVLCFEVALPYLPSKRPIPIYHAPKPKVISEITSLTTTLQTGR 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1866 649 SMART serkin_6 339 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g1866 649 SUPERFAMILY Concanavalin A-like lectins/glucanases 31 263 IPR013320 -
Prci5g1866 649 Gene3D Transferase(Phosphotransferase) domain 1 416 629 - -
Prci5g1866 649 FunFam Lectin-domain containing receptor kinase A4.3 416 629 - -
Prci5g1866 649 PANTHER - 59 609 - -
Prci5g1866 649 Gene3D - 25 274 - -
Prci5g1866 649 FunFam L-type lectin-domain containing receptor kinase IX.1 324 415 - -
Prci5g1866 649 ProSiteProfiles Protein kinase domain profile. 339 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g1866 649 SUPERFAMILY Protein kinase-like (PK-like) 323 632 IPR011009 -
Prci5g1866 649 CDD STKc_IRAK 345 610 - -
Prci5g1866 649 CDD lectin_legume_LecRK_Arcelin_ConA 32 259 IPR001220 GO:0030246
Prci5g1866 649 Gene3D Phosphorylase Kinase; domain 1 324 415 - -
Prci5g1866 649 Pfam Protein kinase domain 340 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g1866 649 Pfam Legume lectin domain 32 267 IPR001220 GO:0030246
Prci5g1866 649 ProSitePatterns Legume lectins alpha-chain signature. 229 238 IPR000985 -
Prci5g1866 649 ProSitePatterns Protein kinases ATP-binding region signature. 345 369 IPR017441 GO:0005524
Prci5g1866 649 ProSitePatterns Serine/Threonine protein kinases active-site signature. 459 471 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g1866 Prci-Chr5 36653357 36655516 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g1866 13 628 Receptor kinase-like Gene Family AT5G10530 57.097 0.0 715
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Prci5g1866 Pkinase 1.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g1866 - - qsa:O6P43_033286 836.254