Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1864 ATGGCATCCTCTGCTCCTGTCTTCTTCATGCTCATCTTCACGTTGTTCTTGTCGCTCCAAGACACTGTAGACTCAGTTTCCCTTAACTTCACCAAGTTCCAACCGAACATGAACCTGATATACTTCCAAGGTGATGCCTTTTCGTCGGATGATGTTCTTCAGCTTACGAAGAACCGACTCGATGGCCCCATCACGAGCAGTGTCGGTCGAGTCTCGTATGCTGAACCGGTTCGTGTTTGGGATAGAACAACAGGGAAGCTCACAGACTTCACCACCCATTTTTCCTTTATAATGAAAGCCGTTGTTCCCACACAATTCGGTGATGGGATATCCTTCTTCCTTTCTCCTTTCCAATCTGAAATCCCGGAGAATTCAACTGGTGGGTACCTTGGTCTCTTCAGTCGAGGATCTGCATTCAATAGCACCAATAATTCTATAGTTGCGGTGGAGTTCGACAGCTTTAACAACACATGGGATCCAACCTCGGACCATGTCGGAATCAATGTGAATTCCATTGCATCAGTTGCGACTGTTACCTGGAAGAGCAGCATGAAGCAAGGGAAAAAAGCTAATGCTTGGATAGAATATAATTCAACCACCAAAAATCTGAGCGTGTTCTTGACTTATGCCGATGATCCGGTTTATATGGGAAATTCTAGTGTTTGGCATATCATTGATTTGAGGGAAGTTTTGCCAGAATGGGTCCGTGTTGGATTTTCTGCTTCTACAGGAGATTGGGTTGAAATACACAATATCTTTTCTTGGTCATTCTATTCAAGCTTGGAAAGTGATGTCAAAGTTGGGAAAGACAAGAAGGTTGTTTTGGGAGTTAGTTTAAGTGTTGGTCTTGGTTCTCTTACTTGTGCAGCAGGTCTTTTATGGTTCGCCATTTGGAGGAAGAAACATGGAAGGAAGAAGCTGGGAGAAGGTATAGGCTTTGAGGCTTCCATGGATGATGAATTTGAAAAAGGAACGGGACCGAAGAGATTCACCTACCAGGAGCTAAGTCATGCAACAAATGATTTCTCTGAAGAAGGAAAGCTAGGAGAAGGAGGATTTGGTGGTGTTTACAAAGGTTTTCTCACAAGCGAAAAGCTACAAGTTGCTGTGAAGAGAGTTTCAAAAGGGTCAAAACAGGGGAAAAAGGAATACATATCAGAAGTGAGGATCATCAGCAGGTTGAGACACAGAAACTTGGTTCAGCTCATTGGGTGGTGCCATGAGCAAGGTGAGTTCCTTCTTGTTTATGAATTCATGCCAAATGGAAGTCTAGACTCCCACCTGTTTGGAAGCAAAACCCCACTTACTTGGACAGTAAGGTACAAGATAGCCTTGGGTTTGGCATCTTCTCTCCTCTATCTTCATGAAGAATGGGAACAGTGTGTAGTCCACAGAGATGTCAAGTCAAGTAATGTCATGTTAGATGCAAACTTCAATGCCAAACTAGGTGACTTCGGTCTTGCAAGGCTAGTTGACCATGAACTGGGGTCTCAAACCACAGTTCTAGCAGGCACAATGGGGTATTTAGCCCCAGAGTGTGTGACCACAGGAAAAGCAAGTAAGGAATCTGATGTTTACAGCTTTGGGGCAGTAGCCCTTGAGATCACATGTGGAAGAAGACCAGTTGAAGTAAGAGCTGAACCAGGCAAGGTAAGAATGGTGGAGTGGGTGTGGGACCTGTATGGAAAAGGGATGCTTCTAGAAGCTGCTGATAAGAAGCTGAATTTGGAATATGATGAGAGGCAAATGGAATGCTTGATGATTGTGGGGTTGTGGTGTTGCCATCCTGATCAGAGGATGAGGCCTTCCATAAGGCAAGTCATAAATCTGCTCAACTTTGAAGCTGCTTTGCCTAGTCTTCCTTCAAAGCTTCCTGTAGCAATGTACTACGCCCCTCCAATGGAAATGTGCAAATTCTCATACACATCGTCCGGGCCCACAGCCTCAACGAAAGGATCATCCTCATACTCATCTGTGTCAGGAGGATCCAGAAAGTCTCTCTTGTTAGCACAATGA 2016 0.4459 MASSAPVFFMLIFTLFLSLQDTVDSVSLNFTKFQPNMNLIYFQGDAFSSDDVLQLTKNRLDGPITSSVGRVSYAEPVRVWDRTTGKLTDFTTHFSFIMKAVVPTQFGDGISFFLSPFQSEIPENSTGGYLGLFSRGSAFNSTNNSIVAVEFDSFNNTWDPTSDHVGINVNSIASVATVTWKSSMKQGKKANAWIEYNSTTKNLSVFLTYADDPVYMGNSSVWHIIDLREVLPEWVRVGFSASTGDWVEIHNIFSWSFYSSLESDVKVGKDKKVVLGVSLSVGLGSLTCAAGLLWFAIWRKKHGRKKLGEGIGFEASMDDEFEKGTGPKRFTYQELSHATNDFSEEGKLGEGGFGGVYKGFLTSEKLQVAVKRVSKGSKQGKKEYISEVRIISRLRHRNLVQLIGWCHEQGEFLLVYEFMPNGSLDSHLFGSKTPLTWTVRYKIALGLASSLLYLHEEWEQCVVHRDVKSSNVMLDANFNAKLGDFGLARLVDHELGSQTTVLAGTMGYLAPECVTTGKASKESDVYSFGAVALEITCGRRPVEVRAEPGKVRMVEWVWDLYGKGMLLEAADKKLNLEYDERQMECLMIVGLWCCHPDQRMRPSIRQVINLLNFEAALPSLPSKLPVAMYYAPPMEMCKFSYTSSGPTASTKGSSSYSSVSGGSRKSLLLAQ 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1864 671 Pfam Legume lectin domain 26 265 IPR001220 GO:0030246
Prci5g1864 671 CDD lectin_legume_LecRK_Arcelin_ConA 26 261 IPR001220 GO:0030246
Prci5g1864 671 SUPERFAMILY Concanavalin A-like lectins/glucanases 24 262 IPR013320 -
Prci5g1864 671 Pfam Protein kinase domain 343 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g1864 671 FunFam L-type lectin-domain containing receptor kinase IX.1 24 270 - -
Prci5g1864 671 Gene3D Transferase(Phosphotransferase) domain 1 419 632 - -
Prci5g1864 671 ProSiteProfiles Protein kinase domain profile. 342 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g1864 671 CDD STKc_IRAK 356 612 - -
Prci5g1864 671 MobiDBLite consensus disorder prediction 648 665 - -
Prci5g1864 671 SMART serkin_6 342 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g1864 671 PANTHER - 49 621 - -
Prci5g1864 671 Gene3D Phosphorylase Kinase; domain 1 327 418 - -
Prci5g1864 671 ProSitePatterns Protein kinases ATP-binding region signature. 348 371 IPR017441 GO:0005524
Prci5g1864 671 ProSitePatterns Serine/Threonine protein kinases active-site signature. 462 474 IPR008271 GO:0004672|GO:0006468
Prci5g1864 671 Gene3D - 23 275 - -
Prci5g1864 671 ProSitePatterns Legume lectins beta-chain signature. 147 153 IPR019825 -
Prci5g1864 671 FunFam Lectin-domain containing receptor kinase A4.3 419 631 - -
Prci5g1864 671 ProSitePatterns Legume lectins alpha-chain signature. 231 240 IPR000985 -
Prci5g1864 671 FunFam L-type lectin-domain containing receptor kinase IX.1 327 418 - -
Prci5g1864 671 SUPERFAMILY Protein kinase-like (PK-like) 326 634 IPR011009 -
Prci5g1864 671 MobiDBLite consensus disorder prediction 648 671 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g1864 Prci-Chr5 36637024 36639285 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g1864 10 630 Receptor kinase-like Gene Family AT5G10530 50.551 0.0 602
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Prci5g1864 Pkinase 6.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g1864 - - gmx:100777201 982.63