Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1857 ATGGCAAATTCAGCAGAAGATCAAGAACACCCAGTTGAGGCATTTGGATGGGCAGCTACACAGCCTAAAGGCCTTCTCTCCCCTTTCAACTTCTCCCGAAGAGCAACCGGCGATCATGACGTGAGGTTTAAGGTATTGTATTGTGGAATATGTCACTCTGACCTTCACGCTGTCAACAACGATTGGGGTCTCTCCCTCTACCCTATTGTTCCTGGGCACGAGGTTGTGGGTGAAGTTACAGAGGTAGGGAAGGAAGTGAAGAAGGTGAAGGTCGGAGACAAAGTAGGTGTGGGATGCATGATCGGTGCCTGCCATGCCTGCGACGACTGTAACAATGACCTTGAGAATTACTGTCCCGGCATGATCCTCACCTACAGTTCCACCTACCACGACGGAACCGTCACTCACGGAGGCTACTCCGACCACATGGTCGCCCACCACCGCTACGTTGTCCTCTTCCCAGACACCATGCCCCTCCACGCCGGAGCTCCTCTGCTCTGCGCCGGCATCACTGTCTACAGTCCCTTGAAATATTATGGACTCGCGGAGCCCGGCAAACACGTCGGTGTGGTCGGCCTCGGTGGTCTCGGCCATCTTGCTGTCAAATTTGCCAGGGCTCTTGGCGCCAAAGTTACTGTCATTAGTACCTCTCACAGTAAACAAGACGAAGCACTTCACCGCCTTGGAGCTCATTCGTTTCTGCTTAGCAGTGATCAGCATCAAATGCAGGAAGCCACGGGAACGATGGATGGTATCATCGACACGGTGTCTGCTGTGCACAGTTTATCGCCATTGATAAAGTTACTAAAGTCGCACGGAAAGCTGGTAATGGTGGGCGCACCAGAGAAACCTTTTGAGCTACTGGTCTTTCCTGATCTCGCAATGGGGAGGAAGATGGTAGGAGGGAGTGCCATAGGAGGAATGAAGGAGACTCAAGAAATGATTGATTTCGCAGCAAAGCACAACGTCACTGCAGATGTTGAAGTAATCCCAATGGATTATGTCAACACTGCCATGGAACGTCTTGCCAGAGCGGACGTTAGATATCGGTTTGTAATTGACATCGGCAACAGCTTGGCTGCTACTAAGCTTTGA 1095 0.5151 MANSAEDQEHPVEAFGWAATQPKGLLSPFNFSRRATGDHDVRFKVLYCGICHSDLHAVNNDWGLSLYPIVPGHEVVGEVTEVGKEVKKVKVGDKVGVGCMIGACHACDDCNNDLENYCPGMILTYSSTYHDGTVTHGGYSDHMVAHHRYVVLFPDTMPLHAGAPLLCAGITVYSPLKYYGLAEPGKHVGVVGLGGLGHLAVKFARALGAKVTVISTSHSKQDEALHRLGAHSFLLSSDQHQMQEATGTMDGIIDTVSAVHSLSPLIKLLKSHGKLVMVGAPEKPFELLVFPDLAMGRKMVGGSAIGGMKETQEMIDFAAKHNVTADVEVIPMDYVNTAMERLARADVRYRFVIDIGNSLAATKL 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1857 364 CDD CAD1 15 354 IPR047109 GO:0016616
Prci5g1857 364 Gene3D - 168 325 - -
Prci5g1857 364 PANTHER ALDEHYDE REDUCTASE 8 358 IPR047109 GO:0016616
Prci5g1857 364 FunFam Cinnamyl alcohol dehydrogenase 168 325 - -
Prci5g1857 364 FunFam probable cinnamyl alcohol dehydrogenase 17 174 - -
Prci5g1857 364 SUPERFAMILY GroES-like 20 186 IPR011032 -
Prci5g1857 364 SMART PKS_ER_names_mod 24 353 IPR020843 GO:0016491
Prci5g1857 364 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 72 86 IPR002328 GO:0008270|GO:0016491
Prci5g1857 364 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 157 323 IPR036291 -
Prci5g1857 364 Pfam Alcohol dehydrogenase GroES-like domain 39 151 IPR013154 -
Prci5g1857 364 FunFam Putative cinnamyl alcohol dehydrogenase 6 326 355 - -
Prci5g1857 364 Gene3D - 17 355 - -
Prci5g1857 364 Pfam Zinc-binding dehydrogenase 195 319 IPR013149 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g1857 Prci-Chr5 36606823 36608523 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g1857 13 359 Monolignol Biosynthesis Gene Families AT4G37990 67.435 1.91e-163 459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g1857 K23232 - cave:132168441 530.02