Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1854 ATGGACAAAACACCTGCCTTTGGGTTAGCCGCTACAGATTCCTCCGGCATCGTTTCCCCTTTTCACTTCTCCAGAAGGAACGAATTGGGACACAGCACCTACCCCATGGTCGCCGGGCACGAGATTGTCGGAGAAGTGATCAAGGTGGGTCACGGTGTCACCAAATTCAAAGCTGGTGATATTGCTGGCGTGGGGCCGATTTGTGGTTCATGTCGATCTTGCTCTAACTGCAATCAAGGCTGGGAAAGTTACTGCCCCAAAAAGATTTTCACCTATAATGCATATGACCACGATGGATCTTTAACTCAAGGTGGATACTCTGATAAAACTGTGGTCGATGAGCATTTCGCCATCAAAATTCCAAAAGGCTTGCCGCTCGACGGTGCAGCCCCGTTGTTGTGCGCTGGAATCACAGTATACAGCCCCATGAAGTTCCATGGACTGTGTCAGCCAGGTCAGCATCTGGGTGTGGTGGGCTTAGGCGGACTCGGCCACGTGGCTGTCAAGTTTGCCAAGGCTTTGAAGATGAAGGTGACAGTGATAAGTACTTCTCCTGGAAAGAAGAAGGAAGCCTTGGAAAGCCTTGGAGCCGACGCTTTCTTGCTAAGTAACGACCCACAACAATTGCAGGCGGGGAAGGATACGTTGGACGGGATTATTGATACGGTTGCAGGGCCTCACTCTCTTTACCCATTAGTTGACTTGTTGAAGACAGGAGGAAAGTTAATTACAGTTGGTGCATCAATTACTCCTCCAGAATTACCCACTATGCCTTTGATGATGGGGAGAAAGATGATTGCTGGAAGTGCTGCTGGAGGAATGGGAGAGACACAAGAGATGATTGATTTGGCAGCGAAGCACAATATAACAGCAGACATTGAAGTGATTCCGATGGATTACGTGAACACTGCTTTAGAGCGAGTCGCCAAGAACGATGTCAAGTATCGTTTTGTGATTGACGTGGCCAACACCCTCCATAAGGTCTCTCTTCTTGACTAG 999 0.4875 MDKTPAFGLAATDSSGIVSPFHFSRRNELGHSTYPMVAGHEIVGEVIKVGHGVTKFKAGDIAGVGPICGSCRSCSNCNQGWESYCPKKIFTYNAYDHDGSLTQGGYSDKTVVDEHFAIKIPKGLPLDGAAPLLCAGITVYSPMKFHGLCQPGQHLGVVGLGGLGHVAVKFAKALKMKVTVISTSPGKKKEALESLGADAFLLSNDPQQLQAGKDTLDGIIDTVAGPHSLYPLVDLLKTGGKLITVGASITPPELPTMPLMMGRKMIAGSAAGGMGETQEMIDLAAKHNITADIEVIPMDYVNTALERVAKNDVKYRFVIDVANTLHKVSLLD 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1854 332 FunFam Putative cinnamyl alcohol dehydrogenase 6 292 321 - -
Prci5g1854 332 Gene3D - 135 291 - -
Prci5g1854 332 Gene3D - 25 321 - -
Prci5g1854 332 PANTHER ALDEHYDE REDUCTASE 26 324 IPR047109 GO:0016616
Prci5g1854 332 SMART PKS_ER_names_mod 16 319 IPR020843 GO:0016491
Prci5g1854 332 CDD CAD1 7 320 IPR047109 GO:0016616
Prci5g1854 332 Pfam Alcohol dehydrogenase GroES-like domain 22 120 IPR013154 -
Prci5g1854 332 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 124 289 IPR036291 -
Prci5g1854 332 Pfam Zinc-binding dehydrogenase 162 285 IPR013149 -
Prci5g1854 332 SUPERFAMILY GroES-like 25 153 IPR011032 -
Prci5g1854 332 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 39 53 IPR002328 GO:0008270|GO:0016491
Prci5g1854 332 FunFam Cinnamyl alcohol dehydrogenase 135 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g1854 Prci-Chr5 36584961 36586978 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g1854 6 325 Monolignol Biosynthesis Gene Families AT4G37990 60.580 2.30e-128 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g1854 K23232 - zju:107425057 456.062