Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1853 ATGGACAAAACACCTGCCTTTGGGTTAGCCGCTACAGATTCCTCCGGCATCGTTTCCCCTTTTCACTTCTCCAGAAGGGCAAATGGTGATCACGATATAACCTTAAAAATCCTGTATTGTGGGATTTGCCACGGTGATGTTCATTTTCTCAGGAACGAATTGGGACACAGCACCTACCCCATGGTCGCCGGGCACGAGATTGTCGGAGAAGTGATCAAGGTGGGTCACGGTGTCACCAAATTCAAAGCTGGTGATATTGCTGGCGTGGGGCCGATTTGTGGTTCATGTCGATCTTGCTCTAACTGCAATCAAGGCTGGGAAAGTTACTGCCCCAAAAAGATTTTCACCTATAATGCATATGACCACGATGGATCTTTAACTCAAGGTGGATACTCTGATAAAACTGTGGTCGATGAGCATTTCGCCATCAAAATTCCAAAAGGCTTGCCGCTCGACGGTGCAGCCCCGTTGTTGTGCGCTGGAATCACAGTATACAGCCCCATGAAGTTCCATGGACTGTGTCAGCCAGGTCAGCATCTGGGTGTGGTGGGCTTAGGCGGACTCGGCCACGTGGCTGTCAAGTTTGCCAAGGCTTTGAAGATGAAGGTGACAGTGATAAGTACTTCTCCTGGAAAGAAGAAGGAAGCCTTGGAAAGCCTTGGAGCCGACGCTTTCTTGCTAAGTAACGACCCACAACAATTGCAGGCGGGGAAGGATACGTTGGACGGGATTATTGATACGGTTGCAGGGCCTCACTCTCTTTACCCATTAGTTGACTTGTTGAAGACAGGAGGAAAGTTAATTACAGTTGGTGCATCAATTACTCCTCCAGAATTACCCACTATGCCTTTGATGATGGGGAGAAAGATGATTGCTGGAAGTGCTGCTGGAGGAATGGGAGAGACACAAGAGATGATTGATTTGGCAGCGAAGCACAATATAACAGCAGACATTGAAGTGATTCCGATGGATTACGTGAACACTGCTTTAGAGCGAGTCGCCAAGAACGATGTCAAGTATCGTTTTGTGATTGACGTGGCCAACACCCTCCATAAGGTCTCTCTTCTTGACTAG 1074 0.4814 MDKTPAFGLAATDSSGIVSPFHFSRRANGDHDITLKILYCGICHGDVHFLRNELGHSTYPMVAGHEIVGEVIKVGHGVTKFKAGDIAGVGPICGSCRSCSNCNQGWESYCPKKIFTYNAYDHDGSLTQGGYSDKTVVDEHFAIKIPKGLPLDGAAPLLCAGITVYSPMKFHGLCQPGQHLGVVGLGGLGHVAVKFAKALKMKVTVISTSPGKKKEALESLGADAFLLSNDPQQLQAGKDTLDGIIDTVAGPHSLYPLVDLLKTGGKLITVGASITPPELPTMPLMMGRKMIAGSAAGGMGETQEMIDLAAKHNITADIEVIPMDYVNTALERVAKNDVKYRFVIDVANTLHKVSLLD 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1853 357 Gene3D - 10 346 - -
Prci5g1853 357 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 64 78 IPR002328 GO:0008270|GO:0016491
Prci5g1853 357 FunFam Cinnamyl alcohol dehydrogenase 160 316 - -
Prci5g1853 357 FunFam probable cinnamyl alcohol dehydrogenase 9 167 - -
Prci5g1853 357 Gene3D - 160 316 - -
Prci5g1853 357 PANTHER ALDEHYDE REDUCTASE 5 349 IPR047109 GO:0016616
Prci5g1853 357 FunFam Putative cinnamyl alcohol dehydrogenase 6 317 346 - -
Prci5g1853 357 CDD CAD1 7 345 IPR047109 GO:0016616
Prci5g1853 357 SUPERFAMILY GroES-like 15 178 IPR011032 -
Prci5g1853 357 SMART PKS_ER_names_mod 16 344 IPR020843 GO:0016491
Prci5g1853 357 Pfam Zinc-binding dehydrogenase 187 310 IPR013149 -
Prci5g1853 357 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 149 314 IPR036291 -
Prci5g1853 357 Pfam Alcohol dehydrogenase GroES-like domain 31 145 IPR013154 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g1853 Prci-Chr5 36584961 36586995 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g1853 6 350 Monolignol Biosynthesis Gene Families AT4G37990 63.768 6.13e-146 415
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g1853 K23232 - zju:107425057 512.301