Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1852 ATGGCCAACCCAATCTCAATCCCAGCACAAGAAGTGCACAAAACACCTGCCTTTGGGTTAGCAGCTACAGATTCCTCCGGCATCGTTTCCCCTTTTCACTTCTCCAGAAGGGCGAACGGTGATCATGATATCACCTTAAAAATCCTGTATTGTGGGATTTGCCACGGTGATGTTCATTTTCTCCGCAACGAAATGGGACACACCACCTATCCCATGGTCGCCGGGCACGAGATCGTCGGAGAAGTCATCAAGGTGGGCCGTAGCGTCACCAAATTCAAAATTGGTGATATTGTTGGCGTGGGGCCGATTTGTGGTTCATGCCGCTCTTGCTCTAACTGCAGTCAAGGCTGGGAAAGTTATTGCCCCGAAAAGATTTTCACCTACAGTGGTTATGATTACGATGGATCCAGAACTCAAGGTGGATACTCTGATAAAACTGTGGTTGATGAGCATTTCGCCATCAAAATTCCGCAAGGCATGCCACTCGACAGTGCAGCACCGTTGTTGTGCGCTGGAATCACTGTATACAGCCCCATGAAGTTCCACGGACTCTGTCAGCCCGGTCAGCATTTGGGAGTGGTGGGCTTGGGAGGACTTGGCCACGTGGCTGTCAAGTTTGCCAAGGCTCTGGAGATGAAGGTGACAGTGATAAGTACTTCTCCTGGAAAGAAGAAGGAAGCCTTGGAGAGGCTTGGAGCTGACGTCTTCTTGCTCAGCAACGACCCACAACAATTGCAGGAGGGGAAGGATACGTTGGACGGAATTATTGATACAGTTGCAGGGCCTCACTCTCTTGAGCCATTAGCTGACTTGTTGAAGACAGGAGGAAAACTGATTATAGTTGGTGCATTATTCCCTCCTCCTGAGCTACCTATTAGGCCTATGATGATGGGGAGGAGGATGATTGCAGGAAGTGCTGCGGGAGGAATGGGAGAGACGCAGGAGATGATTGATTTGGCAGCAAAGCATAATATCACGGCAGATATTGAAGTAATTCCAATGGATTACGTGAACACTGCTTTAGACCGAGTCGCCAAAAACGATGTCAAGTATCGTTTTGTGATTGATGTGGCCAACACCATCCATAAGGTCTCTCCAGATAGTTAG 1107 0.4887 MANPISIPAQEVHKTPAFGLAATDSSGIVSPFHFSRRANGDHDITLKILYCGICHGDVHFLRNEMGHTTYPMVAGHEIVGEVIKVGRSVTKFKIGDIVGVGPICGSCRSCSNCSQGWESYCPEKIFTYSGYDYDGSRTQGGYSDKTVVDEHFAIKIPQGMPLDSAAPLLCAGITVYSPMKFHGLCQPGQHLGVVGLGGLGHVAVKFAKALEMKVTVISTSPGKKKEALERLGADVFLLSNDPQQLQEGKDTLDGIIDTVAGPHSLEPLADLLKTGGKLIIVGALFPPPELPIRPMMMGRRMIAGSAAGGMGETQEMIDLAAKHNITADIEVIPMDYVNTALDRVAKNDVKYRFVIDVANTIHKVSPDS 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1852 368 FunFam Cinnamyl alcohol dehydrogenase 171 327 - -
Prci5g1852 368 Pfam Alcohol dehydrogenase GroES-like domain 42 156 IPR013154 -
Prci5g1852 368 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 160 325 IPR036291 -
Prci5g1852 368 CDD CAD1 18 356 IPR047109 GO:0016616
Prci5g1852 368 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 75 89 IPR002328 GO:0008270|GO:0016491
Prci5g1852 368 Gene3D - 171 327 - -
Prci5g1852 368 Pfam Zinc-binding dehydrogenase 198 321 IPR013149 -
Prci5g1852 368 Gene3D - 21 357 - -
Prci5g1852 368 FunFam Putative cinnamyl alcohol dehydrogenase 6 328 357 - -
Prci5g1852 368 SUPERFAMILY GroES-like 26 189 IPR011032 -
Prci5g1852 368 PANTHER ALDEHYDE REDUCTASE 12 360 IPR047109 GO:0016616
Prci5g1852 368 SMART PKS_ER_names_mod 27 355 IPR020843 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g1852 Prci-Chr5 36580449 36582662 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g1852 12 361 Monolignol Biosynthesis Gene Families AT2G21890 57.265 3.02e-145 414
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g1852 K23232 - zju:107425057 498.049