Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1851 ATGGCCAACCCAATCTCAATCCCAGCACAAGAAGTGCACAAAACACCTGCCTTTGGGGCGAACGGTGATCATGATATCACCTTAAAAATCCTGTATTGTGGGATTTGCCACGGTGATGTTCATTTTCTCCGCAACGAAATGGGACACACCACCTATCCCATGGTCGCCGGGCACGAGATCGTCGGAGAAGTCATCAAGGTGGGCCGTAGCGTCACCAAATTCAAAATTGGTGATATTGTTGGCGTGGGGCCGATTTGTGGTTCATGCCGCTCTTGCTCTAACTGCAGTCAAGGCTGGGAAAGTTATTGCCCCGAAAAGATTTTCACCTACAGTGGTTATGATTACGATGGATCCAGAACTCAAGGTGGATACTCTGATAAAACTGTGGTTGATGAGCATTTCGCCATCAAAATTCCGCAAGGCATGCCACTCGACAGTGCAGCACCGTTGTTGTGCGCTGGAATCACTGTATACAGCCCCATGAAGTTCCACGGACTCTGTCAGCCCGGTCAGCATTTGGGAGTGGTGGGCTTGGGAGGACTTGGCCACGTGGCTGTCAAGTTTGCCAAGGCTCTGGAGATGAAGGTGACAGTGATAAGTACTTCTCCTGGAAAGAAGAAGGAAGCCTTGGAGAGGCTTGGAGCTGACGTCTTCTTGCTCAGCAACGACCCACAACAATTGCAGGAGGGGAAGGATACGTTGGACGGAATTATTGATACAGTTGCAGGGCCTCACTCTCTTGAGCCATTAGCTGACTTGTTGAAGACAGGAGGAAAACTGATTATAGTTGGTGCATTATTCCCTCCTCCTGAGCTACCTATTAGGCCTATGATGATGGGGAGGAGGATGATTGCAGGAAGTGCTGCGGGAGGAATGGGAGAGACGCAGGAGATGATTGATTTGGCAGCAAAGCATAATATCACGGCAGATATTGAAGTAATTCCAATGGATTACGTGAACACTGCTTTAGACCGAGTCGCCAAAAACGATGTCAAGTATCGTTTTGTGATTGATGTGGCCAACACCATCCATAAGGTCTCTCCAGATAGTTAG 1053 0.4881 MANPISIPAQEVHKTPAFGANGDHDITLKILYCGICHGDVHFLRNEMGHTTYPMVAGHEIVGEVIKVGRSVTKFKIGDIVGVGPICGSCRSCSNCSQGWESYCPEKIFTYSGYDYDGSRTQGGYSDKTVVDEHFAIKIPQGMPLDSAAPLLCAGITVYSPMKFHGLCQPGQHLGVVGLGGLGHVAVKFAKALEMKVTVISTSPGKKKEALERLGADVFLLSNDPQQLQEGKDTLDGIIDTVAGPHSLEPLADLLKTGGKLIIVGALFPPPELPIRPMMMGRRMIAGSAAGGMGETQEMIDLAAKHNITADIEVIPMDYVNTALDRVAKNDVKYRFVIDVANTIHKVSPDS 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1851 350 Gene3D - 20 339 - -
Prci5g1851 350 SUPERFAMILY GroES-like 21 171 IPR011032 -
Prci5g1851 350 CDD CAD1 22 338 IPR047109 GO:0016616
Prci5g1851 350 PANTHER ALDEHYDE REDUCTASE 20 342 IPR047109 GO:0016616
Prci5g1851 350 Gene3D - 153 309 - -
Prci5g1851 350 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 57 71 IPR002328 GO:0008270|GO:0016491
Prci5g1851 350 Pfam Zinc-binding dehydrogenase 180 303 IPR013149 -
Prci5g1851 350 SMART PKS_ER_names_mod 6 337 IPR020843 GO:0016491
Prci5g1851 350 Pfam Alcohol dehydrogenase GroES-like domain 24 138 IPR013154 -
Prci5g1851 350 FunFam Cinnamyl alcohol dehydrogenase 153 309 - -
Prci5g1851 350 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 142 307 IPR036291 -
Prci5g1851 350 FunFam Putative cinnamyl alcohol dehydrogenase 6 310 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g1851 Prci-Chr5 36580449 36582663 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g1851 21 343 Monolignol Biosynthesis Gene Families AT2G21890 56.790 4.62e-131 377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g1851 K23232 - zju:107425057 462.611