Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1836 ATGGAATCAAGAGGGAAGGCAGGGAGAGGAGAGACATGCGAGGAGGAGGAATCTCCGAGAGGCGTGCTGGAGATAACGGGGGAATCAGATCGGAGCACCGAGAGCATCGGATGTAGCACGTGCTCGGCGGAGAAGACGATGGGGGCGGGGGCGGAAAGGCCGCCGGCGGGAAGGGAGGGGCAATTGCCGCAGTGGAAGGGAGTGATGGACGCGTTGAGGATAAACTCGGTGAAAAGGCTGTCGGCGATACCGTTGTTCGCGTCGACGTATATGATATCTCGGAAGAGCCTGAAAAAATTGGCGCGCATCAGGAGCGCAGAAGACGCCATAGATCTGGTTTCTTTAGCTACCAAATCTTCTTGGAAGAGCTTCCATTACTCCGAGCTTGCTGCTGCAACGGACGATTTCACTCCCGAGAACTTGATAGGGAAAGGTGGGCATGCGGAAGTGTACAAAGGACGCTTACCCGATGGCCAAATTGTAGCAGTGAAGAAGCTTGTGAATGAGGAAAAGGATGACGGAGATCACACTGGTGATTTCTTGACGGAGCTCGGAATCATCGCCCACATCAACCATCCAAATGCTTGCCAATTGATTGGCTTCGGAATTGACAAGGGCCTCTTCTTCGTCCTTCACTATGCTGCTCATGGCAGCCTATCCTCACTCCTCTTCGGTTCCAAAAAGCTGGAGTGGAAGTTGAGGTTCCAAGTAGCCATTGGAGTAGCAGAGGGACTGAAATATCTTCATCATGAATGCCCTAGGCGAATTATTCACAGAGACATCAAAGCTTCTAACATATTGCTCAACGAGAACTTCGAACCCGAGATTTCAGATTTTGGATTGGCAAAGTGGCTCCCAGAAAAGTGGGACCACCATGTAGTTTTCCCCATAGAAGGCACATTTGGGTATCTAGCTCCAGAGTATTTTATGCATGGAGTTGTGGATGAGAAGACCGATGTGTTCGCATATGGGGTTTTGTTACTTGAGATCATTACAGGTCGTCAGGCTGTTGATTCTGACAGTAGGCAAAGTCTTGTGATTTGGGCAAAGGCACTACTGGACGCGAAAAACATGAAGGAATTGGCAGACCCTAGATTGGAGAATGATTATGATCCTACAGAAATGGAGTGTGCCATGGTCACAGCTGCCATGTGTGTACACCACTCAGCTTCCAAGCGTCCCTTCATGAATCGGGTGGTGCAGATGCTGAAGGGGGAGGAAGGACCTGTGGAAGTGAAGCCACAAAAATCCATGGCCCCAAGATCCCTCATGTTGGATGCCTGTGATCTTGAAGATTATACTTGCTCCAATTATTTGAATGATCTCAATCGACACAGGCAACTAATCATGGAGTGA 1356 0.4963 MESRGKAGRGETCEEEESPRGVLEITGESDRSTESIGCSTCSAEKTMGAGAERPPAGREGQLPQWKGVMDALRINSVKRLSAIPLFASTYMISRKSLKKLARIRSAEDAIDLVSLATKSSWKSFHYSELAAATDDFTPENLIGKGGHAEVYKGRLPDGQIVAVKKLVNEEKDDGDHTGDFLTELGIIAHINHPNACQLIGFGIDKGLFFVLHYAAHGSLSSLLFGSKKLEWKLRFQVAIGVAEGLKYLHHECPRRIIHRDIKASNILLNENFEPEISDFGLAKWLPEKWDHHVVFPIEGTFGYLAPEYFMHGVVDEKTDVFAYGVLLLEIITGRQAVDSDSRQSLVIWAKALLDAKNMKELADPRLENDYDPTEMECAMVTAAMCVHHSASKRPFMNRVVQMLKGEEGPVEVKPQKSMAPRSLMLDACDLEDYTCSNYLNDLNRHRQLIME 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1836 451 FunFam Receptor-like cytosolic serine/threonine-protein kinase RBK1 113 213 - -
Prci5g1836 451 Gene3D Phosphorylase Kinase; domain 1 108 213 - -
Prci5g1836 451 ProSitePatterns Serine/Threonine protein kinases active-site signature. 256 268 IPR008271 GO:0004672|GO:0006468
Prci5g1836 451 Gene3D Transferase(Phosphotransferase) domain 1 215 418 - -
Prci5g1836 451 ProSitePatterns Protein kinases ATP-binding region signature. 142 165 IPR017441 GO:0005524
Prci5g1836 451 SMART serkin_6 136 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g1836 451 Pfam Protein kinase domain 138 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g1836 451 PANTHER OS08G0249100 PROTEIN 12 423 IPR046958 -
Prci5g1836 451 MobiDBLite consensus disorder prediction 1 24 - -
Prci5g1836 451 SUPERFAMILY Protein kinase-like (PK-like) 117 403 IPR011009 -
Prci5g1836 451 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK2 215 417 - -
Prci5g1836 451 ProSiteProfiles Protein kinase domain profile. 136 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g1836 451 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g1836 Prci-Chr5 36480951 36485537 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g1836 122 406 Receptor kinase-like Gene Family AT1G34210 43.390 3.52e-69 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Prci5g1836 Pkinase 9.2e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g1836 - - gmx:100775930 585.874
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci10g1561 10 11009938 11015037 Prci5g1836 5 36480951 36485537 CCT