Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1806 ATGGAGCCAGAAAAAGGCACCGCCGGACGCGGGTCCGGACCCGAACCGGGAAACTTATACTACCTCGGTTTATGCACGTCGCTACTTCGTCTTCGTAAGTTCTCCAGATGCCGCGAGTTCGCTCTCAAGATCCAAAGATCCGACCCAGACATCTCCGACACCGTCGATCGAATACTTGCAATCACCGATGTCCACCTCGCAGCCGAGAGGCGCCTCGACAGCCACTTCGACTGGTACGCTATTCTCCAACTTGGCCGTAGTGACTCCGGAAACCACCAACTCATACGGAATCAATTTAAGAGGCTTGCGCAGCTCTTGAACCCAAACAGAAATGAGTTTGCATCCTCAGATGAAGCGTTCGTGCTCGTGCGCGACGCATGGCGCGTGCTTTCGGACCCAGAAAAGAGAGCCGAATACGAGCAGGCGATTGGCGATTTGGTACGCCAAGAACATTGCAAACAGAGTAGTGAGAGCAAGAAAGAGGGGTTTGGCGTTGTACCCAGAAATGGGCGTAACGTGAATGTAGGTAAACAGAAAGCCTCATTTTGGACTATGTGCCCTTATTGTTGGTCTTTGCATGAGTACGAGAAGATATACGAAGATTGCTCTCTGCGGTGCCCGAAATGCAGGAGGGTGTTTCAAGGGATAGCGGTGAAGCCTCCGACAAATGACATGTTAGTGAAGGGGAAAGACCAATACTATTGCTATTGTGCACATGTTCCTTTAAGGTATCCACCGTCGCAACATTCAGAGGTGAAGGGAAGCAAGTTCAATATGCAAAAGCCGTGGAGCATGGAAGGCTGGATCAAGAATGGAAAATCTTCTGTTGATAGCCCTGAGGACGATGACGTTGACGATTCATCAAAGAATTGCGGAATCGGAGAAGAGGAAAGGGTTTTGCGTGCAGAGCAAGCAGGAACTGAGGGATTGTATGGAGATTTGGGAAATGGGAAGCGGCGGATGAGGGTGAAAACTGTGGCTAGAAATACAAAGAAGATGACCGGGAACAGGATGAGAAACCGGGCATATATTTCACGGGATAGTGATGCTGAATCGTTGGATTTAGATGCAGAAGATGGTGACTGA 1086 0.4972 MEPEKGTAGRGSGPEPGNLYYLGLCTSLLRLRKFSRCREFALKIQRSDPDISDTVDRILAITDVHLAAERRLDSHFDWYAILQLGRSDSGNHQLIRNQFKRLAQLLNPNRNEFASSDEAFVLVRDAWRVLSDPEKRAEYEQAIGDLVRQEHCKQSSESKKEGFGVVPRNGRNVNVGKQKASFWTMCPYCWSLHEYEKIYEDCSLRCPKCRRVFQGIAVKPPTNDMLVKGKDQYYCYCAHVPLRYPPSQHSEVKGSKFNMQKPWSMEGWIKNGKSSVDSPEDDDVDDSSKNCGIGEEERVLRAEQAGTEGLYGDLGNGKRRMRVKTVARNTKKMTGNRMRNRAYISRDSDAESLDLDAEDGD 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1806 361 SMART dnaj_3 76 135 IPR001623 -
Prci5g1806 361 Gene3D DnaJ domain 64 164 IPR036869 -
Prci5g1806 361 SUPERFAMILY Chaperone J-domain 75 150 IPR036869 -
Prci5g1806 361 ProSiteProfiles dnaJ domain profile. 77 143 IPR001623 -
Prci5g1806 361 MobiDBLite consensus disorder prediction 332 361 - -
Prci5g1806 361 CDD DnaJ 77 132 IPR001623 -
Prci5g1806 361 MobiDBLite consensus disorder prediction 269 295 - -
Prci5g1806 361 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 20 339 - -
Prci5g1806 361 Pfam DnaJ domain 77 140 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g1806 Prci-Chr5 36280884 36282428 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g1806 22 244 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 34.802 3.14e-42 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g1806 - - pcin:129311481 729.169