Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1796 ATGGCGGATAGCTTTGACGGGACGACCTCGACCCTTCTTTGTTCGGAGGACAGTAATAACTGCTTTGCAGATTTCGAGCATAATGCCTCCGATGAGCCTGAAATTTTCCGTTCTTTGAACCGCCAAAACTCTGGTTCTTACCGTCATTGGGTGGGTTCGAACATGGACTGGTTCGAATCCGTACTGGGTTTTCCCTTACAGAGTGAAGAAACTCTGAGATTATTGGCTGAGAGGGAGAAAGTTTATATGCCCAAGGATGATTACCTTGTGAGATTGCGGAGTGGGGACTTGGACTTGAGTGTGAGGAGAGAGGCTCTTGATTGGATTTGGAAGGTTCACACCTATTATGGTTTTGGGCCATTGAGCTTTTGTCTATCCATCAACTATTTTGATCGGTTCCTATCGATGTATGATTTGCCTAGAAGCCAAAAATGGACAGGTCAATTGTTAGCCGTAGCTTGTTTGTCAATAGCAACCAAAGTGGAGGAAACCAAAATTCCTCAACTGATAGAATTTCAGGTTGAAGGACCAAAGTTTTTATTTGAAGCCAGAACCATCCAAAGAATGGAGCTTTTGATACTGAACACATTGCAATGGAAAATGCATGCTTTCACTCCTTGTTCCTTCATAGACTACTTCTTCCGTAAAATGGCTTACCACCAACATACAGACTCATTAAAGTCATCCATTTCTAGATCAATACAGCTCATACTTGGTACAATAAGAGGTGTTGATTTCTTGGAATTCAGGCCTTCTGAGATTGCTGCTGCAGTGGCCATTTCTGTTTCAAGAGAACTGCAAGCAACGGAGATTGACAAGGCTATGACTTGTTTTGTGATTGTACAAAAGGAGAGAGTTCTGAAGTGTGTTGAACTGATCAGAGATTTGTGTTTGGTTAGTGTTTCTGCTGCTAATTTAGGGAGGAACTCGGGGCCATTTTTACCTCAAAGTCCCATGGGGGTGTTGGATGCTGCAAGCTTGAGCTACAAGAGTGAGGAACTAACAGATGGATCATGTCCAAATTCTTCACATGATAGTCCAAATACTAGGAGGAACGAATCAGGCAAACCTGAAGACACTTCCAAGTCATGA 1092 0.4286 MADSFDGTTSTLLCSEDSNNCFADFEHNASDEPEIFRSLNRQNSGSYRHWVGSNMDWFESVLGFPLQSEETLRLLAEREKVYMPKDDYLVRLRSGDLDLSVRREALDWIWKVHTYYGFGPLSFCLSINYFDRFLSMYDLPRSQKWTGQLLAVACLSIATKVEETKIPQLIEFQVEGPKFLFEARTIQRMELLILNTLQWKMHAFTPCSFIDYFFRKMAYHQHTDSLKSSISRSIQLILGTIRGVDFLEFRPSEIAAAVAISVSRELQATEIDKAMTCFVIVQKERVLKCVELIRDLCLVSVSAANLGRNSGPFLPQSPMGVLDAASLSYKSEELTDGSCPNSSHDSPNTRRNESGKPEDTSKS 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1796 363 SUPERFAMILY Cyclin-like 62 202 IPR036915 -
Prci5g1796 363 CDD CYCLIN_AtCycD-like_rpt1 101 199 - -
Prci5g1796 363 SMART Cyclin_C_2 204 330 IPR004367 -
Prci5g1796 363 FunFam D2/4-type cyclin 85 197 - -
Prci5g1796 363 FunFam D6-type cyclin 198 291 - -
Prci5g1796 363 CDD CYCLIN_AtCycD-like_rpt2 205 293 - -
Prci5g1796 363 Gene3D - 74 292 - -
Prci5g1796 363 MobiDBLite consensus disorder prediction 332 363 - -
Prci5g1796 363 Pfam Cyclin, N-terminal domain 73 201 IPR006671 -
Prci5g1796 363 MobiDBLite consensus disorder prediction 332 348 - -
Prci5g1796 363 SMART cyclin_7 107 195 IPR013763 -
Prci5g1796 363 Pfam Cyclin, C-terminal domain 205 299 IPR004367 -
Prci5g1796 363 MobiDBLite consensus disorder prediction 349 363 - -
Prci5g1796 363 ProSitePatterns Cyclins signature. 102 133 IPR006671 -
Prci5g1796 363 Gene3D - 85 202 - -
Prci5g1796 363 PANTHER CYCLINS 70 294 IPR039361 -
Prci5g1796 363 SUPERFAMILY Cyclin-like 186 299 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g1796 Prci-Chr5 36240689 36243333 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g1796 67 274 Core Cell Cycle Gene Families AT5G65420 57.895 6.73e-86 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g1796 K18810 - qsa:O6P43_025224 432.18