Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1779 ATGTGGCAACTTGTTGCTCAAGACCGATGGGTTATTTTCGCTGCATTCTCTGCTCTGATTCTTGCGGCGGTTTCGGAGATTTCCATACCGCATTTCTTAACTGCATCTATCTTTTCCGCACAGGGTGCGGAAATTACAGTTTTCCGTCGGAATGTACTTCTCTTGGTTCTGTTCTGTATAACTTCGGGAATATGCAGCGGGATACGAGGCTGCTGTTTTGGAATTGCAAATATGATACTGGTAAAGAGAATGAGAGAAACATTATACTCCTCCCTTCTTCTTCAGGATATATCATTTTTTGACAATGTAACAGTTGGTGATCTGACAAGTAGGCTAGGTGCCGATTGTCAACAAGTTTCACGTGTTATTGGAAATGACCTTAACTTGATATTGCGCAATGTTCTTCAGGGAGCTGGTGCTTTAACCTACTTGTTATTTTTGTCTTGGCCACTTGGTTTATTTACATTGATGATATGCTCTGTATTGTCAGCAGTTTTGCTACTTTATGGAAGGTACCAGAAAAAGGCAGCAAAGTTGATCCAAGAAGTCACTGCTTCTGCTAATGAAGTTGCACAAGAGACATTCTCTCTCATTAGAACTGTCCGCGTTTATGGAACAGAAGAGGAAGAACTTGGAAGGTATAAATGGTGGCTCGAAAAGTTAGCTGATATAAGCTTGAGACAAAGTGCTGCTTATGGATTTTGGAATTTCAGCTTCAACAATCTTTATCATTCAACTCAGGTTATTGCGGTGCTGTTTGGAGGAATGTCTATTCTAGCAGGTCATATTACAGCAGAGAAACTTACTAAGTTTATACTATACAGTGAATGGCTTATTTATTCAACCTGGTGGGTGGGAGACAGTATATCATCTTTGATGCAATCTGTTGGGGCTAGTGAAAAAGTGTTCCAGTTGATGGATCTCTCACCTAGCAAGCAGTTCCAAGCGAAAGGAGCAAAGTTGCAGAGGTTAATTGGGAATATTGAATTTGTTAATGTATCTTTTCACTATCCTTCAAGGCCAACGGTATCTGTAGTGCAGCATGTAAGTTTTGCTGTTCGACCTGGTGAAGTGGTTGCAATAGCTGGTCTTAGTGGCAGTGGAAAGAGTACACTAGTGAACCTTCTGCTCCGCTTATATGAGCCAACCAATGGTCAGATTTTGATTGATGGCGCCCCTCTTAAAGAGCTGGACATCACTTGGTGGAGAGAAAGAATCGGATTTGTGGGACAGGAACCTAAGCTCTTCAGAATGGATATCAATTCAAACATAAGATATGGATGCACTCGGGAGATTAAGCAAGAGGATGTTGAATGGGCTGCAAAGCAAGCATATGCCCATGACTTCATCTCAGCACTTCCTAATGGGTATGAAACACTTGTTGACGATGATTTGTTGAGTGGGGGACAAAAGCAGCGAATTGCTATTGCTAGAGCTATTCTCAGGGATCCAAAAATATTGATCCTTGATGAAGCCACCAGTGCACTGGATGCTGAGAGTGAACATAATGTCAAGGGCGTTCTCCGTTCTGTTAAAAATGACTCCCTGACTATGAGAAGTGTCATTGTTATTGCGCACAGGCTTTCTACTATACAAGCAGCCGACAGGGTTGTGGTAATGGATAGTGGTAAAATTGTTGAGATTGGGAGTCACAGGGAACTACTCTTAAGGGACGGTTTGTATGCACGATTGACTAGTAAACAGGCTGACGCAGTGGCTTGA 1722 0.4216 MWQLVAQDRWVIFAAFSALILAAVSEISIPHFLTASIFSAQGAEITVFRRNVLLLVLFCITSGICSGIRGCCFGIANMILVKRMRETLYSSLLLQDISFFDNVTVGDLTSRLGADCQQVSRVIGNDLNLILRNVLQGAGALTYLLFLSWPLGLFTLMICSVLSAVLLLYGRYQKKAAKLIQEVTASANEVAQETFSLIRTVRVYGTEEEELGRYKWWLEKLADISLRQSAAYGFWNFSFNNLYHSTQVIAVLFGGMSILAGHITAEKLTKFILYSEWLIYSTWWVGDSISSLMQSVGASEKVFQLMDLSPSKQFQAKGAKLQRLIGNIEFVNVSFHYPSRPTVSVVQHVSFAVRPGEVVAIAGLSGSGKSTLVNLLLRLYEPTNGQILIDGAPLKELDITWWRERIGFVGQEPKLFRMDINSNIRYGCTREIKQEDVEWAAKQAYAHDFISALPNGYETLVDDDLLSGGQKQRIAIARAILRDPKILILDEATSALDAESEHNVKGVLRSVKNDSLTMRSVIVIAHRLSTIQAADRVVVMDSGKIVEIGSHRELLLRDGLYARLTSKQADAVA 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1779 573 Pfam ABC transporter transmembrane region 14 279 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci5g1779 573 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 328 567 IPR003439 GO:0005524
Prci5g1779 573 SMART AAA_5 355 544 IPR003593 GO:0016887
Prci5g1779 573 CDD ABC_6TM_TAP 15 302 - -
Prci5g1779 573 SUPERFAMILY ABC transporter transmembrane region 2 308 IPR036640 GO:0005524|GO:0016020
Prci5g1779 573 FunFam Multidrug ABC transporter ATP-binding protein 320 572 - -
Prci5g1779 573 PANTHER ABC TRANSPORTER B FAMILY 6 564 IPR039421 -
Prci5g1779 573 FunFam ABC transporter B family member 26, chloroplastic 1 313 - -
Prci5g1779 573 ProSitePatterns ABC transporters family signature. 466 480 IPR017871 GO:0005524|GO:0016887
Prci5g1779 573 Gene3D ABC transporter type 1, transmembrane domain 1 314 IPR036640 GO:0005524|GO:0016020
Prci5g1779 573 Gene3D - 318 572 IPR027417 -
Prci5g1779 573 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 13 294 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci5g1779 573 Pfam ABC transporter 347 494 IPR003439 GO:0005524
Prci5g1779 573 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 320 568 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g1779 Prci-Chr5 36053346 36060803 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g1779 83 571 Calmodulin-binding Proteins AT2G36910 33.735 8.55e-72 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g1779 - - pcin:129311051 991.49