Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1769 ATGGCTTCCTTTAATCTTCTTCCTTCTCTAGCTCATCTTCCCCTGCTAGCTACTTTATTTGTTACAGTTTTCCCCTTTCAAACGTCCATCAAAGTATCTTTTATGGCCCCTTTTAAATGCTCTGCAAAAATCAACACATGTAATGCCATGCTTTACCACGTAAACCATGGTCTTGACATGGAAGACATAGCCTCTCATTACTCCGTTAATTCATCCCAAATTCAACACATAACACGGGGCACTAACCAAGATTACCTCATAACTGTTCCTTGTTCTTGTAAAACCGTCACAAACCTTAGGGGATATTTCTTCAACACAACTTACACGGTGGAGGAAAATCAGACCTATATGAATCTGTCAAACTTCTATTACAGTGGACAAGCCTGGTCTCCTACTGATAATGTGACCACGGGTGAAAACTTAACTATACATCTTCCCTGTGGATGCACAGACATTGATTCTCAAATCGTTGTGACATATACAGTCCAGCAGAATGATACAACAGCAGAAATCGCTAATATGCTGTCATCTACACTTACTGGCATTCAGAACATGAATGAAGTTTTAGCTAATAGGCCTTCATTCATAGATGTGGGTTGGGTGTTATATGTTCCTAAGGAGCTCAACGGGATTCCATCTCCAAAAGGAAGTGGAAAGAAACTCAAGCATTATAGTATTATTGGCGTCTTAGTTGGTGTGACATTACTTTCTGTTATCACAATGATCATTCTAATTCTGCGGAGAAAAAGAGCCACTGAAACCAGCAGAGAAGACGCAAAAGCTGTATCGAAAAGATCAACTTCAAAACCATTATCTAAAAGATCAATTTCCAATAGAACTACTTCCTTAAAGAACCATCAATTTCATATAGAAACTATAGAAGGTAAATCAAAAAGGCTAAATATCATTACAATTAATGTTTGTGCAGAAGTAACATCAATCGACTCGGAAAGACCAGCAACGTTTTATCTTGAGGAGATTGAGGAGGCCATAAACAAAGAAGGTAAAATAATAGGAAAGGGCGGATATGGGACTGTATATTTTGGAATTTTAGGAGAGAAGGAGGTTGCTATAAAAGAAATGAGGTCTAATAAATCCAAAGAGTTCTATGCAGAACTCAAGGTCTTATGCAGGATCCATCATATCAACATTGTGGAGCTATTGGGATATGCCAGTGGAGAAGATAACCTCTATTTGGTGTATGAGTATGTTTCAAAAGGATCTCTCAGCGACCATCTTCACGATCCATTTCTAAAAGGTCATGAACCTCTTTCATGGACTGCTAGAGCACAGATTGCTCTGGATGCTGCTAAAGGTCTTGAATACATACATGATTACACAAAAGCACGGCATGTGCATAGAGATATCAAGACTAGCAATATTCTTCTTGACAACAAACTCAGAGCCAAGATTGCAGATTTCGGACTAGTAAAGCTGTTAGAACGAACAAATGATGATGATTTTATAGCAACAAGGCTTGTTGGGACACCAGGCTACCTTCCACCGGAATCTGTGAAGGAGCTTCAGGTGACCTCAAAAACCGATGTTTTTGCATTTGGAGTAGTTCTAGCAGAGCTAGTAACAGGGAAACCTGCTCTATTTCGTGAAAGCCAAGAAATCCCCAGAATGAGATCACTTATTTCTGTCATTAATGGAGTATTTGAAGCTGATGACCCAGAGAATGTTTTAGAAGATATCATAGACAAAAACCTTCGAGATAGCTATCCTATGGAGGATGTCTTCAAGATGTTAGAAATAGCTCAAAGATGCTTACGCGAAGAACCAATTGAGAGGCCAGAAATGAGGGAGATTGTGGTGATATTGTCACAGATTGTTATGTCCTCCACAGAGTGGGAAGCATCACTAGGTGGTGACAGTGAGGTCTTTAGCGGCATATTCACTGGAAGATGA 1911 0.3946 MASFNLLPSLAHLPLLATLFVTVFPFQTSIKVSFMAPFKCSAKINTCNAMLYHVNHGLDMEDIASHYSVNSSQIQHITRGTNQDYLITVPCSCKTVTNLRGYFFNTTYTVEENQTYMNLSNFYYSGQAWSPTDNVTTGENLTIHLPCGCTDIDSQIVVTYTVQQNDTTAEIANMLSSTLTGIQNMNEVLANRPSFIDVGWVLYVPKELNGIPSPKGSGKKLKHYSIIGVLVGVTLLSVITMIILILRRKRATETSREDAKAVSKRSTSKPLSKRSISNRTTSLKNHQFHIETIEGKSKRLNIITINVCAEVTSIDSERPATFYLEEIEEAINKEGKIIGKGGYGTVYFGILGEKEVAIKEMRSNKSKEFYAELKVLCRIHHINIVELLGYASGEDNLYLVYEYVSKGSLSDHLHDPFLKGHEPLSWTARAQIALDAAKGLEYIHDYTKARHVHRDIKTSNILLDNKLRAKIADFGLVKLLERTNDDDFIATRLVGTPGYLPPESVKELQVTSKTDVFAFGVVLAELVTGKPALFRESQEIPRMRSLISVINGVFEADDPENVLEDIIDKNLRDSYPMEDVFKMLEIAQRCLREEPIERPEMREIVVILSQIVMSSTEWEASLGGDSEVFSGIFTGR 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1769 636 Pfam Protein kinase domain 334 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g1769 636 MobiDBLite consensus disorder prediction 255 276 - -
Prci5g1769 636 Gene3D LysM domain 152 209 IPR036779 -
Prci5g1769 636 SUPERFAMILY LysM domain 158 205 IPR036779 -
Prci5g1769 636 ProSitePatterns Protein kinases ATP-binding region signature. 338 359 IPR017441 GO:0005524
Prci5g1769 636 SUPERFAMILY Protein kinase-like (PK-like) 334 608 IPR011009 -
Prci5g1769 636 Pfam LysM domain 160 205 IPR018392 -
Prci5g1769 636 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 31 630 IPR044812 GO:0019199|GO:0045087
Prci5g1769 636 FunFam PTI1-like tyrosine-protein kinase 3 404 622 - -
Prci5g1769 636 ProSiteProfiles LysM domain profile. 158 204 IPR018392 -
Prci5g1769 636 Gene3D Phosphorylase Kinase; domain 1 306 403 - -
Prci5g1769 636 ProSiteProfiles Protein kinase domain profile. 332 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g1769 636 Gene3D Transferase(Phosphotransferase) domain 1 404 624 - -
Prci5g1769 636 SMART serkin_6 332 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g1769 Prci-Chr5 35989375 35993575 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g1769 317 636 Receptor kinase-like Gene Family AT1G51940 50.760 1.25e-112 350
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Prci5g1769 Pkinase 7.8e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g1769 - - gmx:100800907 785.793