Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1765 ATGGAGATTCCAGATTCTGCAATTGAATCTCAGGAGCGAAAATTCGCTCTTCCTGTGGATTCTGAACACAAGGCCACTGAGTTCAAATTATTCTCAGCGGCTAAACCCCACATGCGAACATTCCATCTTTCTTGGATCTCCTTCTTCGCATGCTTCGTCTCTAGCTTCGCTGCTCCTCCTCTCCTTCCTCTCATTCGCGATAATCTCAATCTCACAGCCACAGACATTGGAAATGCTGGGATTGCTTCTGTTTCTGGTGCAGTTTTCGCTCGAATCGCAATGGGCACCGTGTGTGACTTGTTTGGCCCTCGTCTTGCTTCCGCCTCTCTCATTCTCCTCACAGTGCCGGCAGTCTATTGTTCTTCCATCATCTCATCTTCTACCTCCTTCCTTCTCGTTCGCTTCTTCACAGGCTTCTCTCTATCCACCTTCGTCTCAACCCAGTTCTGGATGAGCTCTATGTTCTCTACTCGGGTCGTTGCTTCGGCCAATGGACTCGCAGCTGGATGGGGCAACCTAGGAGGAGGAGCCACACAGCTTGTTATGCCTATTGTATTTGGAATCGTACGTGATATTGGTGCTGAGAAATTCACAGCATGGCGAATAGCGTTTTTCATTCCTGCAATATTTCAGATGTTAACAGCATTTGCAGTGTTCATATTTGGCCAGGATTTGCCAGATGGGAATTTCCACACCTTGAAGAAATCTGGAGAGAAGGTAAAGGATGACTTCAACAGAGTTCTTTTCTTTGGGATTTCAAATTACAGAGGGTGGATTCTGGCATTGACATATGGATATTGCTTTGGGGTAGAGCTAACAATAGATAACATCATAGCAGAGTATTTCTATGACAGATTTAACCTGAAACTCCACACGGCAGGAATAATTGCTGCAAGTTTTGGATTAGCTAATATATTTTCTCGACCTGGCGGAGGGTATATGTCAGATTTAGTGGGGAAGCGGTTTGGAATGAGAGGAAGGCTTTGGGCCTTGTGGCTGTGTCAAACCATAGGAGGCTTGTTCTGTGTAATCCTCGGAAAGGTGGCATCTTTAACAGTGTCCATAATTGTCATGATCATATTCTCTATATTTATTCAAGCTGCCTGTGGGATGACCTTTGGGGTGGTTCCTTTTGTATCGAGAAGATCATTGGGGGTCATCTCTGGAATGACAGGAGGTGGAGGAAACGTGGGTGCAGTTTTGACGCAGTTAATATTCTTCACAGGATCAAGATATTCAAAAGAAACAGGCATTACCTTAATGGGTGTGATGATCATATGTTGCACACTTCCATTATGTTTGATATACTTCCCCCAATGGGGTGGCATGCTTTGTGGTCCATCGTCGAAGCAATTTTCTGAAGAAGATTACTACTTGTCTGAGTGGAGTTCCAAGGAACAAGAGAAAGGGTCCCACCATGGAAGCTTGAAGTTTGCAGATAACAGCAGAAGTGAAAGAGGCAGAAGCAGTGCTCGCTCTGCTGCAACCAGGCCTTCTGATGATGTCACGCCACCACGTGTCTGA 1524 0.4554 MEIPDSAIESQERKFALPVDSEHKATEFKLFSAAKPHMRTFHLSWISFFACFVSSFAAPPLLPLIRDNLNLTATDIGNAGIASVSGAVFARIAMGTVCDLFGPRLASASLILLTVPAVYCSSIISSSTSFLLVRFFTGFSLSTFVSTQFWMSSMFSTRVVASANGLAAGWGNLGGGATQLVMPIVFGIVRDIGAEKFTAWRIAFFIPAIFQMLTAFAVFIFGQDLPDGNFHTLKKSGEKVKDDFNRVLFFGISNYRGWILALTYGYCFGVELTIDNIIAEYFYDRFNLKLHTAGIIAASFGLANIFSRPGGGYMSDLVGKRFGMRGRLWALWLCQTIGGLFCVILGKVASLTVSIIVMIIFSIFIQAACGMTFGVVPFVSRRSLGVISGMTGGGGNVGAVLTQLIFFTGSRYSKETGITLMGVMIICCTLPLCLIYFPQWGGMLCGPSSKQFSEEDYYLSEWSSKEQEKGSHHGSLKFADNSRSERGRSSARSAATRPSDDVTPPRV 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1765 507 SUPERFAMILY MFS general substrate transporter 33 436 IPR036259 -
Prci5g1765 507 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 7 489 IPR044772 GO:0015112
Prci5g1765 507 Gene3D MFS general substrate transporter like domains 249 441 IPR036259 -
Prci5g1765 507 FunFam Nitrate transporter 2.1 241 442 - -
Prci5g1765 507 MobiDBLite consensus disorder prediction 466 487 - -
Prci5g1765 507 CDD MFS_NRT2_like 41 434 IPR044772 GO:0015112
Prci5g1765 507 FunFam High affinity nitrate transporter 2.5 33 229 - -
Prci5g1765 507 Pfam Major Facilitator Superfamily 45 401 IPR011701 GO:0022857|GO:0055085
Prci5g1765 507 ProSiteProfiles Major facilitator superfamily (MFS) profile. 40 439 IPR020846 GO:0022857
Prci5g1765 507 MobiDBLite consensus disorder prediction 466 507 - -
Prci5g1765 507 Gene3D MFS general substrate transporter like domains 33 230 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g1765 Prci-Chr5 35921668 35924420 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g1765 13 496 Inorganic Solute Cotransporters AT1G12940 73.967 0.0 757
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g1765 K02575 - gmx:100787888 801.586