Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1755 ATGGAAGAAATCTACGGAGTGCCGATGTCGGCGGACTACTCCGACAAGGCCTTGATGACGCCGGAGAACCTCATATTCGCCACCGATTACCAGAGTTTTCTCCCGTCCTCCTCCGGCGGCTTCCATGATCGGAATCCGATGTTCGGATCTAACGACCTGCTTTCTGCCATTTCCGAAGCTGAGCCGCCGTCTGTCGCCCCTGAAATTCAACCTGAAGACAGTGCCTCCTCTCTCATCAAAGCCAAAATCGCTTCTCATCCTCACTACCCTCGTCTCCTCCATGCTTTCATCGACTGCCAGAAGGTGGGAGCGCCTCCAGAAATCGCGTGCCTGTTAGACGAAATCCAGCGGGAAAACGATGTCTGTAAGCGAGAGGTTGTTTCCACGTGCTTCGGTGACGATCCCGAGCTCGACGAGTTCATGGAAACCTATTGCGACCTGCTGATGAAGTATAAGTCTGATCTTTCCCGGCCGTTTGACGAAGCAACTACTTTCCTCAACGAGATCGAAATCCAGCTCAGCCATCTCTGCTCTGGTGCTCCCGTTCCAACTCTTTCCGATGAAGGAGGCGTGTCTTCAGAGGAAGATGTAAGTGTAGGAGATAGGGATGCACGAGACGGTCGATTGCGGGGGGAAGACCGGGAGCTGAAGGACAGGCTTTTAAACAAGTTTGGTAGCCGTATTAGCAGTTTGAAATTAGAGTTCTCGAAGAAGAAGAAGAAGGGCAAGCTCCCTAAAGAGGCTAGGCAAACGCTTCTTGACTGGTGGAATGTTCACTATAAATGGCCTTACCCTACGTAG 801 0.5181 MEEIYGVPMSADYSDKALMTPENLIFATDYQSFLPSSSGGFHDRNPMFGSNDLLSAISEAEPPSVAPEIQPEDSASSLIKAKIASHPHYPRLLHAFIDCQKVGAPPEIACLLDEIQRENDVCKREVVSTCFGDDPELDEFMETYCDLLMKYKSDLSRPFDEATTFLNEIEIQLSHLCSGAPVPTLSDEGGVSSEEDVSVGDRDARDGRLRGEDRELKDRLLNKFGSRISSLKLEFSKKKKKGKLPKEARQTLLDWWNVHYKWPYPT 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1755 266 Pfam KNOX2 domain 131 177 IPR005541 GO:0003677|GO:0005634
Prci5g1755 266 Pfam KNOX1 domain 79 120 IPR005540 GO:0003677|GO:0005634
Prci5g1755 266 ProSiteProfiles ELK domain profile. 215 235 IPR005539 GO:0003677
Prci5g1755 266 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 76 266 - -
Prci5g1755 266 SMART KNOX1_2 77 121 IPR005540 GO:0003677|GO:0005634
Prci5g1755 266 SMART ELK_2 215 236 IPR005539 GO:0003677
Prci5g1755 266 MobiDBLite consensus disorder prediction 184 208 - -
Prci5g1755 266 Pfam ELK domain 215 236 IPR005539 GO:0003677
Prci5g1755 266 Gene3D - 233 266 - -
Prci5g1755 266 SMART KNOX2_2 127 178 IPR005541 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g1755 Prci-Chr5 35871189 35878621 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g1755 1 266 Homeobox Transcription Factor Family AT1G23380 64.388 6.08e-112 324
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g1755 - - lja:Lj2g3v1415210.1 365.925