Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1750 ATGGAAACTACCGGTTCGGTTTTCTGGCTTCTGGCTTTGCTGCTTCTGGCGTTGATGGAGATTTCTTCTGCGGCGCTTTCTCCTTCTGGGATAAATTATGAAGTTGTAGCTCTGATGGCCATAAAAAATGAATTACATGATCCCCACAGTGTCCTGGAGAGTTGGGATATTAATTCTGTCGATCCTTGTAGCTGGAGGATGATTACTTGTACTCCAGATGGCTCCGTCTCTGCTTTAGGATTGCCCAGTCAGAACTTGTCTGGTAAGCTATCTCCTGGGATTGGAAATTTGACGAACTTGCAATCTGTGTTGCTTCAGAACAATGCCATTTCTGGTTCAATTCCCGCGGCTATAGTAAAGCTGGAAAAGCTTCAGACGCTTGATCTTTCCAATAATACATTTAGTGGTGAGATACCTAGTTCTCTGGGGAGCCTCAAGAACCTGCATTATCTGCGGTTGAATAATAACAGCCTCTCAGGATCTTGCCCTCAGTCTCTTGGCAACATTGCGGGTCTCACCCTTGTGGATCTCTCTTATAACAATTTGAGTGGTTCGTTGCCAAGAATATCAGCAAGAACATTCAAGATTGTGGGAAACTCTTTGATTTGTGGTCCAAATGCTAATAATAACTGCTCTAATGTTCTGCCGGAGCCACTTACCTTTTCCCCAGATTCTTTAAGAGAGCAATATGACCCAGAGGTGCGCCTTGGCCATTTGAGAAGGTATTCATTCAAAGAACTTCGAGCTGCAACAGATCATTTCAGTTCAAAGAACATTCTTGGACGGGGTGGCTTTGGAATAGTCTACAAAGGGCGCTTCAATGATGGCTCTGTTGTAGCAGTTAAAAGGTTGAAGGACTATAATGCTGGTGGTGGCGAAATTCAATTTCAGACAGAAGTTGAGACCATAAGTTTGGCTGTCCACCGGAATCTCTTGAGGCTTTGTGGGTTTTGCAGTACTGAAAACGAAAGGCTCCTTGTTTATCCATATATGCCTAATGGCAGTGTAGCCTCTCGATTAAAAGATCATATTCATGGTCGACCAGCCTTAGACTGGGTGAGGAGGAAGAAAATAGCTTTGGGTACAGCGAGAGGATTGGTTTACTTGCATGAGCAATGCGACCCTAAAATCATTCACCGTGATGTGAAAGCAGCCAACATTTTGTTGGATGAAGACTTTGAAGCAGTTGTCGGTGATTTTGGTTTGGCAAAGCTTCTGGATCACAGAGACTCCCATGTAACTACAGCTGTGCGTGGGACCGTCGGTCACATTGCTCCAGAATATTTATCGACAGGCCAGTCTTCAGAAAAGACTGATGTGTTCGGTTTTGGGATCTTACTGCTCGAGCTGATCACAGGTCACAAGGCTTTGGATTTTGGACGAGCAGCAAACCAGAAAGGTGTAATGCTTGATTGGGTTAAGAAGCTCCACCAAGAAGGAAGATTAAGTCAAATGGTTGACAAAGATCTGAAGGGGAACTTCGATGCAGTTGAACTGGAAGAAATGGTTCAGGTGGCACTGTTATGTACACAATTTAATCCTTTGCACAGACCTAAGATGTCAGAAGTTTTGAAGATGTTGGAGGGAGATGGCTTAGCTGAGAGGTGGGAGGAAGCTTCGCAGAAGTCAGAGACAAGGTTCAGGTCTTTCGAAAACCCTCCTCAAAGGTACTCAGATTTTATAGAAGAATCTTCACTCATACTTGAAGCTATGGAGCTTTCTGGCCCTCGGTGA 1734 0.4441 METTGSVFWLLALLLLALMEISSAALSPSGINYEVVALMAIKNELHDPHSVLESWDINSVDPCSWRMITCTPDGSVSALGLPSQNLSGKLSPGIGNLTNLQSVLLQNNAISGSIPAAIVKLEKLQTLDLSNNTFSGEIPSSLGSLKNLHYLRLNNNSLSGSCPQSLGNIAGLTLVDLSYNNLSGSLPRISARTFKIVGNSLICGPNANNNCSNVLPEPLTFSPDSLREQYDPEVRLGHLRRYSFKELRAATDHFSSKNILGRGGFGIVYKGRFNDGSVVAVKRLKDYNAGGGEIQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLKDHIHGRPALDWVRRKKIALGTARGLVYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGHKALDFGRAANQKGVMLDWVKKLHQEGRLSQMVDKDLKGNFDAVELEEMVQVALLCTQFNPLHRPKMSEVLKMLEGDGLAERWEEASQKSETRFRSFENPPQRYSDFIEESSLILEAMELSGPR 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1750 577 Gene3D Phosphorylase Kinase; domain 1 225 330 - -
Prci5g1750 577 ProSitePatterns Protein kinases ATP-binding region signature. 260 282 IPR017441 GO:0005524
Prci5g1750 577 SMART serkin_6 254 527 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g1750 577 Gene3D Transferase(Phosphotransferase) domain 1 331 547 - -
Prci5g1750 577 FunFam Putative LRR receptor-like serine/threonine-protein kinase 31 213 - -
Prci5g1750 577 ProSiteProfiles Protein kinase domain profile. 254 537 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g1750 577 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 10 538 - -
Prci5g1750 577 SUPERFAMILY L domain-like 32 199 - -
Prci5g1750 577 Gene3D Ribonuclease Inhibitor 31 213 IPR032675 -
Prci5g1750 577 SUPERFAMILY Protein kinase-like (PK-like) 229 528 IPR011009 -
Prci5g1750 577 FunFam Somatic embryogenesis receptor-like kinase 1 331 547 - -
Prci5g1750 577 ProSitePatterns Serine/Threonine protein kinases active-site signature. 377 389 IPR008271 GO:0004672|GO:0006468
Prci5g1750 577 FunFam Somatic embryogenesis receptor kinase 1 224 330 - -
Prci5g1750 577 Pfam Leucine rich repeat N-terminal domain 32 70 IPR013210 -
Prci5g1750 577 Pfam Protein kinase domain 255 525 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g1750 Prci-Chr5 35812008 35817530 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g1750 67 577 Receptor kinase-like Gene Family AT1G60800 71.303 0.0 773
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Prci5g1750 Pkinase 2.2e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g1750 - - gmx:100784164 987.252