Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1749 ATGGAAACTACCGGTTCGGTTTTCTGGCTTCTGGCTTTGCTGCTTCTGGCGTTGATGGAGATTTCTTCTGCGGCGCTTTCTCCTTCTGGGATAAATTATGAAGTTGTAGCTCTGATGGCCATAAAAAATGAATTACATGATCCCCACAGTGTCCTGGAGAGTTGGGATATTAATTCTGTCGATCCTTGTAGCTGGAGGATGATTACTTGTACTCCAGATGGCTCCGTCTCTGCTTTAGGATTGCCCAGTCAGAACTTGTCTGGTAAGCTATCTCCTGGGATTGGAAATTTGACGAACTTGCAATCTGTGTTGCTTCAGAACAATGCCATTTCTGGTTCAATTCCCGCGGCTATAGTAAAGCTGGAAAAGCTTCAGACGCTTGATCTTTCCAATAATACATTTAGTGGTGAGATACCTAGTTCTCTGGGGAGCCTCAAGAACCTGCATTATCTGCGGTTGAATAATAACAGCCTCTCAGGATCTTGCCCTCAGTCTCTTGGCAACATTGCGGGTCTCACCCTTGTGGATCTCTCTTATAACAATTTGAGTGGTTCGTTGCCAAGAATATCAGCAAGAACATTCAAGATTGTGGGAAACTCTTTGATTTGTGGTCCAAATGCTAATAATAACTGCTCTAATGTTCTGCCGGAGCCACTTACCTTTTCCCCAGATTCTTTAAGAGCCCAATCAGCATCTGGAACAAAAAGCCACCATGTTGCAGTTGCTTTTGGAGCAAGTTTTGGAGTTGCTTTTGTCATTGTGATTGTGGCTGTCTTTATTGTTTGGCTGCGATACAGACACAACAAACAGATATTCTTTGATGTTAACGAGCAATATGACCCAGAGGTGCGCCTTGGCCATTTGAGAAGGTATTCATTCAAAGAACTTCGAGCTGCAACAGATCATTTCAGTTCAAAGAACATTCTTGGACGGGGTGGCTTTGGAATAGTCTACAAAGGGCGCTTCAATGATGGCTCTGTTGTAGCAGTTAAAAGGTTGAAGGACTATAATGCTGGTGGTGGCGAAATTCAATTTCAGACAGAAGTTGAGACCATAAGTTTGGCTGTCCACCGGAATCTCTTGAGGCTTTGTGGGTTTTGCAGTACTGAAAACGAAAGGCTCCTTGTTTATCCATATATGCCTAATGGCAGTGTAGCCTCTCGATTAAAAGATCATATTCATGGTCGACCAGCCTTAGACTGGGTGAGGAGGAAGAAAATAGCTTTGGGTACAGCGAGAGGATTGGTTTACTTGCATGAGCAATGCGACCCTAAAATCATTCACCGTGATGTGAAAGCAGCCAACATTTTGTTGGATGAAGACTTTGAAGCAGTTGTCGGTGATTTTGGTTTGGCAAAGCTTCTGGATCACAGAGACTCCCATGTAACTACAGCTGTGCGTGGGACCGTCGGTCACATTGCTCCAGAATATTTATCGACAGGCCAGTCTTCAGAAAAGACTGATGTGTTCGGTTTTGGGATCTTACTGCTCGAGCTGATCACAGGTCACAAGGCTTTGGATTTTGGACGAGCAGCAAACCAGAAAGGTTAA 1551 0.4417 METTGSVFWLLALLLLALMEISSAALSPSGINYEVVALMAIKNELHDPHSVLESWDINSVDPCSWRMITCTPDGSVSALGLPSQNLSGKLSPGIGNLTNLQSVLLQNNAISGSIPAAIVKLEKLQTLDLSNNTFSGEIPSSLGSLKNLHYLRLNNNSLSGSCPQSLGNIAGLTLVDLSYNNLSGSLPRISARTFKIVGNSLICGPNANNNCSNVLPEPLTFSPDSLRAQSASGTKSHHVAVAFGASFGVAFVIVIVAVFIVWLRYRHNKQIFFDVNEQYDPEVRLGHLRRYSFKELRAATDHFSSKNILGRGGFGIVYKGRFNDGSVVAVKRLKDYNAGGGEIQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLKDHIHGRPALDWVRRKKIALGTARGLVYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGHKALDFGRAANQKG 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1749 516 FunFam Somatic embryogenesis receptor-like kinase 1 380 516 - -
Prci5g1749 516 ProSiteProfiles Protein kinase domain profile. 303 516 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g1749 516 SUPERFAMILY Protein kinase-like (PK-like) 280 507 IPR011009 -
Prci5g1749 516 Pfam Leucine rich repeat N-terminal domain 32 70 IPR013210 -
Prci5g1749 516 Pfam Protein kinase domain 304 506 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g1749 516 SUPERFAMILY L domain-like 32 199 - -
Prci5g1749 516 Gene3D Phosphorylase Kinase; domain 1 272 379 - -
Prci5g1749 516 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 10 510 - -
Prci5g1749 516 Gene3D Transferase(Phosphotransferase) domain 1 380 516 - -
Prci5g1749 516 FunFam Putative LRR receptor-like serine/threonine-protein kinase 31 213 - -
Prci5g1749 516 ProSitePatterns Protein kinases ATP-binding region signature. 309 331 IPR017441 GO:0005524
Prci5g1749 516 Gene3D Ribonuclease Inhibitor 31 213 IPR032675 -
Prci5g1749 516 FunFam Somatic embryogenesis receptor kinase 1 272 379 - -
Prci5g1749 516 ProSitePatterns Serine/Threonine protein kinases active-site signature. 426 438 IPR008271 GO:0004672|GO:0006468
Prci5g1749 516 SMART serkin_6 303 506 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g1749 Prci-Chr5 35812002 35816991 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g1749 67 516 Receptor kinase-like Gene Family AT1G60800 78.222 0.0 671
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Prci5g1749 Pkinase 1.7e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g1749 - - gmx:100784164 883.248