Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1741 ATGTCAACACTCAATGATCTTCATCTTCAAGAGCACATATGCTACGTGAAATGTGGATTCTGCACCACCATCTTACTGGTCAGTGTCCCATGCAGTAGCTTATCAATGGAGGTGACTGTGAGGTGTGGAAACTGCACAACCCTCCTCTCTGTTAGTATGATGAAAGCTTCTTTTGTCCCTTTTCAACTCTTCCCCTCTCTTACTTGTCTGGATCAGCCCAAAGAGGGTCGCCCAGAAGAAAATATTGCAGACAAGAGTACTTGCTCTGATAGTGGGGAAGATGATGCAATTCCAATGAGTTATTATGCCATTAATGAACGCCCAGGGAAAAGACAAAAAACACCTTCAGCTTATAATCGCTTCATCAGAGAAGAGATCAGAAGGCTGAAGATTGAAAATCCTGACATGGTCCATAAGGAAGCTTTTAGAACTGCAGCAAAAAATTGGGCCAATTTCCCTCAAGCTCAATCTGAAGGAGATGAAGGGAGTAGCCAATCAGGGCAGGTTGAGAATACAGACTCAACATGTGGACCCACATGA 540 0.437 MSTLNDLHLQEHICYVKCGFCTTILLVSVPCSSLSMEVTVRCGNCTTLLSVSMMKASFVPFQLFPSLTCLDQPKEGRPEENIADKSTCSDSGEDDAIPMSYYAINERPGKRQKTPSAYNRFIREEIRRLKIENPDMVHKEAFRTAAKNWANFPQAQSEGDEGSSQSGQVENTDSTCGPT 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1741 179 MobiDBLite consensus disorder prediction 75 91 - -
Prci5g1741 179 MobiDBLite consensus disorder prediction 75 95 - -
Prci5g1741 179 MobiDBLite consensus disorder prediction 148 179 - -
Prci5g1741 179 PANTHER PROTEIN YABBY 6-RELATED 2 165 IPR006780 GO:0007275
Prci5g1741 179 MobiDBLite consensus disorder prediction 149 179 - -
Prci5g1741 179 Gene3D High mobility group box domain 104 159 IPR036910 -
Prci5g1741 179 Pfam YABBY protein 9 156 IPR006780 GO:0007275
Prci5g1741 179 SUPERFAMILY HMG-box 106 155 IPR036910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g1741 Prci-Chr5 35738228 35740994 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g1741 2 158 C2C2-YABBY Transcription Factor Family AT1G23420 52.299 1.62e-50 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Prci5g1741 YABBY 1.3e-48 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g1741 K25796 - gmx:100804172 206.838