Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1714 ATGAATTTTAGTGAGGAAACGAACAACGTTTCGCCGTCTCCGGAAGGATCGCTTCGTCCAACATCAGACAATAATTTGGAGATCCTCACGCAGAAAGATAAAAAGTCACTTTCGGCATCCGCCCCTTCAAGGTCGGAAAAGGGTTCGGAAAAGGACGACGCTCCGCCACCGAACTCTGATGATTCAAACTCCTTATCTAAGCCACCACCATTGCCGTCTCAGACTACCCCGATTCTGCCAAGCTCACCATCACCTAAAGAATCACATTCTAAGAAATCACCGCCAGCACCGCTAACGCCTCCTCCACCGGTAAAACCACCGCCGAATCCAGAGGTAACGCAACCACCCCGTTCATCGGTGAGGCAATCGCCTCATTCACCACCATCTCCACCTCCACCACCACCACCATCACCACCCTCCTCACTCTCGCAACCTCCCACCTCTTCGCCGTCGCCACCGACGCCGCCATTATCGAGTAATGGGAAAAATCTCTCTCACAGTCCCCCTGAACAGTCAGCATCATCACCAGATTCACAAGACCCGTCTTCTTCGAATAACTCTTCTAATAATTCACCACCACAACAACCTTTTGTCAGTGTCCTTTTCCCATCGTTGATACAAAGCGCCCCGCCACCACAAACGCAGGTTGAAGAGGGTATCGAATCGGGTTCAGATAATCCTTCACCGCCCCACTCACCAGGACTTAACACTGGCTCAAATACAAGATCAAGGGGTTCTTCTAACGACTCCGTGCCGTCAACGTCAGGAGGTGACGATGGCAATGGCAGCGACGGTAATGCAGCAAAATATGTGGGTATTGCATTCGCCGGCGTCTGCATCGTTGTCTTTGTTGGTTTATGTTTTTTGGTCGCAAAAGTAAGAAAGAGAAAACGAGGGGCCGTCCATGATGTATCTCACATTCCGCCCAATGTGAAAGCAGGTGAAGATTGGCGTTGCTACGGACTGCAGCCCCTGCAAGATGACCAGTACAAAAATGGGAGTCAAATGGCAAGTGTGCAACCTTTGGGAACTTCAGAGTCAGTGCAGCCCATGAGTGCTCAGACAGCTTTTAGCTATGAAAGTATTGTAGAGATCACAAAGGGGTTCTCTAGTCAAAACATTATAGGAGAAGGGGGATTTGGATGCGTTTACAAGGGTTGGCTCGCGGATGGAAGAGCAGTAGCAGTCAAGAAGCTGAAGGCAGGCAGCGGGCAAGGCGATCGGGAATTCAAGGCAGAAGTGGAGATCATCAGCCGTGTTCATCATCGACATTTGGTATCCTTAGTTGGTTATTGCATATCTGAGCAACAAAAGATTCTTCTGTACGAGTTTGTTCCCAATGGAACGCTCGATCATCACTTGCATGGAAAGGGAATGCTTGTGTTGGATTGGGCCATGAGGGTGAAGATAGCAATTGGTGCTGCAAGAGGCCTGGCATATCTGCATGAGGATTGCCAGCCAAAGATTATCCACAGAGATATAAAGTCAGCAAATATACTTTTGGATGATGCTTATGTGGCGAAGGTTTCAGACTTTGGACTTGCGAGGCTAACAGATGATGCTAATACTCATGTATCAACAAGGGTCATGGGAACCTTTGGGTACATGGCTCCAGAGTATGCTACAAGTGGAAAATTAACTGATAGATCTGATGTTTTCTCCTTTGGAGTTGTCCTCCTAGAGCTTTTGACTGGAAGGAAACCTGTTGATCAAACTCAGCCACTGGGAGAAGAGAGTTTGGTTGAGTGGGCTAGACCTCATCTCATTCATGCAGTGGATACTGGTGACTTTAGCAAATTAATAGACGCAAGGCTTGAAAATCATTATGTGGAGAAAGAAGTGCTTAGAATGATTGACGCAGCTGCAGCATGTGTTCGCCACTCTGCTCTAAAACGGCCCCGGATGCTTCAGGTCGTGAGAGCCTTAGATAGTGGAAGTGAACTAATTGACCTATCCAACGGATTGAAATATGGTCAGAGCACTGCTTATGATTCTGGACAGTATGATAAAGAAATTATGAGATTTAGGATGATGAATGGTGTAAGCTTTAGCAGTTCTGAATTTGATTTGCATGATGAAGAATACAGTTCGAGTGAATTATCTGGCATCCAACACACATGTGCCTAG 2127 0.473 MNFSEETNNVSPSPEGSLRPTSDNNLEILTQKDKKSLSASAPSRSEKGSEKDDAPPPNSDDSNSLSKPPPLPSQTTPILPSSPSPKESHSKKSPPAPLTPPPPVKPPPNPEVTQPPRSSVRQSPHSPPSPPPPPPPSPPSSLSQPPTSSPSPPTPPLSSNGKNLSHSPPEQSASSPDSQDPSSSNNSSNNSPPQQPFVSVLFPSLIQSAPPPQTQVEEGIESGSDNPSPPHSPGLNTGSNTRSRGSSNDSVPSTSGGDDGNGSDGNAAKYVGIAFAGVCIVVFVGLCFLVAKVRKRKRGAVHDVSHIPPNVKAGEDWRCYGLQPLQDDQYKNGSQMASVQPLGTSESVQPMSAQTAFSYESIVEITKGFSSQNIIGEGGFGCVYKGWLADGRAVAVKKLKAGSGQGDREFKAEVEIISRVHHRHLVSLVGYCISEQQKILLYEFVPNGTLDHHLHGKGMLVLDWAMRVKIAIGAARGLAYLHEDCQPKIIHRDIKSANILLDDAYVAKVSDFGLARLTDDANTHVSTRVMGTFGYMAPEYATSGKLTDRSDVFSFGVVLLELLTGRKPVDQTQPLGEESLVEWARPHLIHAVDTGDFSKLIDARLENHYVEKEVLRMIDAAAACVRHSALKRPRMLQVVRALDSGSELIDLSNGLKYGQSTAYDSGQYDKEIMRFRMMNGVSFSSSEFDLHDEEYSSSELSGIQHTCA 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1714 708 MobiDBLite consensus disorder prediction 1 261 - -
Prci5g1714 708 FunFam Proline-rich receptor-like protein kinase PERK8 342 444 - -
Prci5g1714 708 FunFam proline-rich receptor-like protein kinase PERK8 445 657 - -
Prci5g1714 708 ProSitePatterns Serine/Threonine protein kinases active-site signature. 489 501 IPR008271 GO:0004672|GO:0006468
Prci5g1714 708 SUPERFAMILY Protein kinase-like (PK-like) 345 642 IPR011009 -
Prci5g1714 708 Gene3D Phosphorylase Kinase; domain 1 332 444 - -
Prci5g1714 708 MobiDBLite consensus disorder prediction 121 157 - -
Prci5g1714 708 Gene3D Transferase(Phosphotransferase) domain 1 445 653 - -
Prci5g1714 708 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 280 679 IPR047117 -
Prci5g1714 708 MobiDBLite consensus disorder prediction 94 114 - -
Prci5g1714 708 Pfam Protein tyrosine and serine/threonine kinase 372 641 IPR001245 GO:0004672|GO:0006468
Prci5g1714 708 SMART serkin_6 369 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g1714 708 MobiDBLite consensus disorder prediction 1 44 - -
Prci5g1714 708 MobiDBLite consensus disorder prediction 158 261 - -
Prci5g1714 708 PRINTS Proline rich extensin signature 94 110 - -
Prci5g1714 708 PRINTS Proline rich extensin signature 134 155 - -
Prci5g1714 708 PRINTS Proline rich extensin signature 121 133 - -
Prci5g1714 708 PRINTS Proline rich extensin signature 75 87 - -
Prci5g1714 708 ProSiteProfiles Protein kinase domain profile. 369 649 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g1714 708 ProSitePatterns Protein kinases ATP-binding region signature. 375 398 IPR017441 GO:0005524
Prci5g1714 708 CDD STKc_IRAK 375 643 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g1714 Prci-Chr5 35605673 35610666 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g1714 243 696 Trihelix Transcription Factor Family AT1G70460 60.294 0.0 563
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Prci5g1714 PK_Tyr_Ser-Thr 6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g1714 - - cave:132179339 592.808