Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1694 ATGGCTTCATCGATGAGGATCTCAAGGCTGCTCTCTCGCTCTCTCGCTTCTGCTTCGCTGTTTTCCCGAGGAGGTGGGAATGGTTACTTGAGTAGAGGGCTGAGTAAATACAGTACTGCTTCTGCTGCTCTTGAAGAACCGATTAAGCCGTCGATTCAAGTGGAACACACTCAGCTCCTAATCAATGGGCAATTCGTGGATGCTGCTTCCGGCAAAACTTTTCCAACATTGGACCCCAGGACAGGGGAAGTAATTGCACATGTTGCCGAGGGTGACTCTGAAGATGTAGATCGAGCAGCTGTAGCTGCACGCAAGGCATTTGATGAAGGGCCTTGGCCAAGAATGACAGCCTATGAAAGACAAAAGATATTGCTGCGTGCTGCTGACCTTATTGAGAAGCATAATGATGAGCTTGCGACACTTGAGACTTGGGACAACGGGAAGCCATATGCCCAAGCTGCTCAGATTGAAGTCCCAATGCTGGTTCGTCTAATTCGATATTATGCTGGTTGGGCTGATAAGATTCATGGCCTCACGGTTCCTGCCGATGGACCACATCACGTGCAAACATTGCATGAACCAATTGGTGTTGCCGGTCAGATCATTCCTTGGAACTTCCCTCTTCTCATGTTTGCATGGAAGGTTGGGCCTGCGTTGGCATGTGGCAACACTATCGTTTTGAAAACAGCAGAACAAACGCCATTATCTGCTTTATATGCAGCTAAGCTATTCCATGAGGCTGGGCTTCCTTCTGGTGTTTTAAATATTATCTCTGGATTTGGTCCAACCGCTGGTGCTGCTGTTGCTAGTCATATGGATATCGATAAGGTTGCTTTTACTGGATCAACTGATACTGGAAAAATCGTCCTTGAACTGGCAGCAAGAAGTAATCTCAAGACTGTAACTCTGGAACTTGGTGGGAAATCCCCCTTCATTGTATGTGAAGATGCTGATGTAGATGTAGCCGTAGAGCTAGCACACTTTGCATTATTCTTTAATCAGGGACAGTGCTGCTGTGCTGGGTCTCGTACATTTGTGCATGAAAGTATATATGATGAATTCGTTGAAAAAGCCAAGGCACGTGCTTTGAAACGTGCTGTTGGTGATCCATTCAAGGGGGGAATAGAGCAAGGTCCTCAGATTGATTCAGAACAATTTGAGAAGATACTGAAGTATATAAGATCTGGTGTTGAAAGTGGAGCCTCTCTAGAAACTGGGGGAGAGAGACTAGGAGATAAAGGCTTCTATATCAAGCCCACCGTGTTTACAAATGTTCAGGACAATATGTCGATTGCGAAGGATGAGATATTTGGCCCTGTGCAATCTATTTTGAAATACAAGGACCTCGATGAAGTGATTCGGAGAGCAAACAACTCACGCTATGGCCTGGCAGCCGGAGTGTTCACGAAAAGCATAGCCACAGCAAACACTCTGACTCGAGCACTGCGAGTGGGGACAGTATGGGTAAATTGCTTTGATATATTTGATGCTGCAATTCCTTTTGGAGGGTACAAGATGAGTGGGCAAGGCAGAGAAAAAGGGATTTACAGTCTTAAAAACTACTTGCAAGTGAAGGCCGTGGTTACTCCCTTGGAGAACCCAGCATGGCTTTGA 1614 0.461 MASSMRISRLLSRSLASASLFSRGGGNGYLSRGLSKYSTASAALEEPIKPSIQVEHTQLLINGQFVDAASGKTFPTLDPRTGEVIAHVAEGDSEDVDRAAVAARKAFDEGPWPRMTAYERQKILLRAADLIEKHNDELATLETWDNGKPYAQAAQIEVPMLVRLIRYYAGWADKIHGLTVPADGPHHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYAAKLFHEAGLPSGVLNIISGFGPTAGAAVASHMDIDKVAFTGSTDTGKIVLELAARSNLKTVTLELGGKSPFIVCEDADVDVAVELAHFALFFNQGQCCCAGSRTFVHESIYDEFVEKAKARALKRAVGDPFKGGIEQGPQIDSEQFEKILKYIRSGVESGASLETGGERLGDKGFYIKPTVFTNVQDNMSIAKDEIFGPVQSILKYKDLDEVIRRANNSRYGLAAGVFTKSIATANTLTRALRVGTVWVNCFDIFDAAIPFGGYKMSGQGREKGIYSLKNYLQVKAVVTPLENPAWL 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1694 537 Pfam Aldehyde dehydrogenase family 65 527 IPR015590 GO:0016491
Prci5g1694 537 CDD ALDH_F2BC 54 529 - -
Prci5g1694 537 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 331 342 IPR016160 GO:0016491
Prci5g1694 537 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 41 527 - -
Prci5g1694 537 FunFam Mitochondrial aldehyde dehydrogenase 2 309 498 - -
Prci5g1694 537 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 303 310 IPR029510 GO:0016491
Prci5g1694 537 SUPERFAMILY ALDH-like 52 531 IPR016161 GO:0016491
Prci5g1694 537 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 61 319 - -
Prci5g1694 537 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 61 525 IPR016162 GO:0016491
Prci5g1694 537 FunFam Aldehyde dehydrogenase, putative 499 525 - -
Prci5g1694 537 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 307 496 IPR016163 GO:0016620
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g1694 Prci-Chr5 35462669 35466907 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g1694 3 537 Aldehyde Dehydrogenase Gene Family AT3G48000 75.978 0.0 878
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g1694 K00128 - gmx:100777399 910.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci5g1694 5 35462669 35466907 Prci5g1694 5 35462669 35466907 ECH