Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1677 ATGATGGAGGAACATGTCAGTCCATTGGCTGCTACAACACATCTTCTTCAACACACACTGAGAAGTTTGTGCATCCATCAAAATTCCCAGTGGGTATATGCAATCTTCTGGAGGATCTTGCCTAGAAACTACCCTCCACCCAAGTGGGATTGGGAAGGTCAAGGGACTTATGACAGATCAAGAGGAAACAGAAGGAACTGGATATTGGCGTGGGAAGATGGTTTCTGCAATTTTGCAGCCTCATCATCTGTTTATAATGGGAATTACTATCAAGGGTTGCAACCTGAGCTGTTCTTCAAGATGTCACATGAGATCTATAGTTATGGAGAAGGGTTAATAGGAAAAGTTGCTGCAGATCACAGCCACAAGTGGATCTACAGCAAACCTATTAAAGATCAAGAAATCAACTTGGTCTCAGCATCTGCAGATTCGTATCCGAGGACTTGGGAAGCTCAGTTCCAATGTGGCATAAAGACCATAGCACTGATTAGTGTAAGAGAAGGAGTTATGCAACTGGGATCAGTTCAGAAGGTGATAGAAGACCCGAGCCACGTGGTACAGTTAAGAAGAAAGTTGAGCTACATAGAGAGCATCCCAGGAGTGCTATTGCCACACCCATCATCATCATCTTCCTTTTCTTGTGCACTAGGTTATGGAGTTTCAGAACAAAAATGGCTGCAACCTGATGAACTTTCATATGACCCATACTTGAAAGTGAGTCCTTCAATGAGCAGCCTTGAGGCCTTACTGTCTAAACTACCTTCAGTGGTCCCGTCTCCTCCGCCGCCGCTGCCGCCGCTTCCACAGTCAGAGGCTCTGTTCTTATCGTCCCAAAGGTCGGTAGAATTGATGGGATTGCAGAGAGGAGTGAAGGAAGATGTTGAGGACGAATATAAGCCTCAAGTGATAGAGGTGGGTGAGACCAGCAGCTCCATGCACAAAAGAAACGTAATTAGCTAG 960 0.4542 MMEEHVSPLAATTHLLQHTLRSLCIHQNSQWVYAIFWRILPRNYPPPKWDWEGQGTYDRSRGNRRNWILAWEDGFCNFAASSSVYNGNYYQGLQPELFFKMSHEIYSYGEGLIGKVAADHSHKWIYSKPIKDQEINLVSASADSYPRTWEAQFQCGIKTIALISVREGVMQLGSVQKVIEDPSHVVQLRRKLSYIESIPGVLLPHPSSSSSFSCALGYGVSEQKWLQPDELSYDPYLKVSPSMSSLEALLSKLPSVVPSPPPPLPPLPQSEALFLSSQRSVELMGLQRGVKEDVEDEYKPQVIEVGETSSSMHKRNVIS 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1677 319 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 90 190 IPR025610 -
Prci5g1677 319 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 16 78 IPR025610 -
Prci5g1677 319 PANTHER TRANSCRIPTION FACTOR MYC/MYB-RELATED 2 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g1677 Prci-Chr5 35282927 35284558 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g1677 17 189 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 31.073 3.69e-17 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g1677 - - tcc:18609421 381.333