Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1673 ATGAAAGAGTGGCGGTGGTTGAGTTGGGTGTACTCCCTGAGGCAATTCAAGATGGTGGGAAGAGGGGGAACATGGTCCCTGCGTGCTGGGACACCTCACAAACAAACACTCACCCGGAAAACCCGGGATGAGAGCCAGCTGTCCCCCACTCCCTCTCCAACCTCATTGGACTTTGATCCAAGGCCTTCTTCGTTGCTTGTTACGTTAAGCAATTGCGCTCTTTGTCCTTCAGGCAGCTTTATAACAATAGGAAAGCTAGCGAAGCAGAGAAGGAGCGAGAAAATTACAGACGAGAAGATCAATGGAGGAGATCAAAGTAGCAGCATTAATGGTAGCTGTTCAGTTTCGGAAGTGGGACTGAACACTCTGATCAAAGCAGCCACCTCCAAAGGGATGAGCGACTATGTTTTCGTCGTCTACTCAAACGCCATGGCTCTCTCTCTCCTCCTTCCTTCTTCCTTCCTCTATTACAGAAAACGACCTTCTCCCTCCATCACCGCCCCAATCATCTGCAGAATATTTCTTCTCAGCTTGCTCAGTTGTGCAGCGCAGACATTGACATATACTGGTGTTGGATATAGCTCTCCTGTTCTCGCTTCAGTCATGGCTGATCTCTCCCCAGCTTTTACCTTCCTTCTTGCCATCCTTTTCGGGCAAGTGAGTAGTCACGCAAAGTGTATTGGTACAGTACTGTCAATTGTAGGAGCGTTAATGGTGACAATGTACAAAGGTGAGGCCAGTGGTGGAGGTTCGGAGTTGGAAGACAAAGCAAAGGGGCCAACGGGAGGAAGTTTCGTGTCAGAAGATGATAAGTGGCTTCTTGGAGGCACTCTACTTGCAGGTGGCAGCTTCTGCGTTTCACTGATCTTTAACGTTAAGACATGGATAATGAAGGAGTATCCTGAAGTGGTAATGACAGCAACCATTTCATGCGGCTTGGTGGTGATGTTATCCACCATGGTTGCTCTTGTTGCTGAGAGAAATCATGCACAAGCATGGACCCTTCAACCTGATATGGAGTTGGCTGCTATATTATATCTGTACATACATACTTGCATACAGGGCCTTATTGTGGTATCAATGAGAAGCATAACGCATATATGGGCATGTGGAAAGAAGGGACCTGTGTACGTGGCCATGTTCACTCCTTTAGGAATGGTCATGGCACTTGCCATGGGACTTCTATTTCTGGGCGAATCTCTTTCTCTTGGAAGTGTGATTGGTGGTGGTGTAATATCTATTGGGTTTTATGGCGTTTTATGGGGACAGGCTCAACAGGAAAAAATGGCTTTTGAGACAAAAGTCATCTGTAGCTCTGTGTCGTCTTCTTCTAATGCAGTGCCTCTTCTGCAGAACCAGAGAGCGTGA 1368 0.473 MKEWRWLSWVYSLRQFKMVGRGGTWSLRAGTPHKQTLTRKTRDESQLSPTPSPTSLDFDPRPSSLLVTLSNCALCPSGSFITIGKLAKQRRSEKITDEKINGGDQSSSINGSCSVSEVGLNTLIKAATSKGMSDYVFVVYSNAMALSLLLPSSFLYYRKRPSPSITAPIICRIFLLSLLSCAAQTLTYTGVGYSSPVLASVMADLSPAFTFLLAILFGQVSSHAKCIGTVLSIVGALMVTMYKGEASGGGSELEDKAKGPTGGSFVSEDDKWLLGGTLLAGGSFCVSLIFNVKTWIMKEYPEVVMTATISCGLVVMLSTMVALVAERNHAQAWTLQPDMELAAILYLYIHTCIQGLIVVSMRSITHIWACGKKGPVYVAMFTPLGMVMALAMGLLFLGESLSLGSVIGGGVISIGFYGVLWGQAQQEKMAFETKVICSSVSSSSNAVPLLQNQRA 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1673 455 SUPERFAMILY Multidrug resistance efflux transporter EmrE 145 243 - -
Prci5g1673 455 MobiDBLite consensus disorder prediction 27 59 - -
Prci5g1673 455 Pfam EamA-like transporter family 119 240 IPR000620 GO:0016020
Prci5g1673 455 SUPERFAMILY Multidrug resistance efflux transporter EmrE 353 424 - -
Prci5g1673 455 MobiDBLite consensus disorder prediction 42 59 - -
Prci5g1673 455 PANTHER WAT1-RELATED PROTEIN 115 433 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g1673 Prci-Chr5 35272187 35275751 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g1673 116 426 Nodulin-like Gene Family AT3G28050 43.614 5.40e-71 227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g1673 - - pcin:129310862 845.499