Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1653 ATGACGACGGGGAAACTGACGCTACAAAGTGATGTTTTATGCTTTGGTGTTGTTCTTCTTGAGCTTTTGACAGGACGTCGAGCTGTAGATTTAAACCAAGGTCCAAATGATCAAAACCTTGTATTACAGGTGAGAAACATACTGAATGACCGCAAGAAGCTCCGCAGGGTGATAGACCCAGAAATGGCACGAAATTCTTATACCATGGAGTCCATAGCCATGTTTGCCAATCTTGCATCACGATGTATCCGCACAGACAGTAGTGAGAGACCTTCTATGGCAGAATGTGTAAAAGAGCTGCAAATGATTATCTACACTAATTCAAAAGGCTTGGCAATGGTTATGCATAGTTTGAGAATGATCTAA 366 0.418 MTTGKLTLQSDVLCFGVVLLELLTGRRAVDLNQGPNDQNLVLQVRNILNDRKKLRRVIDPEMARNSYTMESIAMFANLASRCIRTDSSERPSMAECVKELQMIIYTNSKGLAMVMHSLRMI 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1653 121 SUPERFAMILY Protein kinase-like (PK-like) 3 107 IPR011009 -
Prci5g1653 121 Pfam Protein tyrosine and serine/threonine kinase 3 100 IPR001245 GO:0004672|GO:0006468
Prci5g1653 121 PANTHER OS01G0750732 PROTEIN 2 105 - -
Prci5g1653 121 Gene3D Transferase(Phosphotransferase) domain 1 1 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g1653 Prci-Chr5 35227515 35228712 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g1653 3 103 Receptor kinase-like Gene Family AT4G02010 39.604 4.90e-21 85.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIb Prci5g1653 PK_Tyr_Ser-Thr 2.7e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g1653 - - pcin:129310861 236.884