Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1644 ATGTCGGTTTCCTGCACTGACTACTTCCCCGATTCCGACCTTCTCTGCGACGAGGACACCTCCGGAATCTTGTCCGGAGAGTCGACGGAGTGCTCCTTCGACCTCGATTCCTCTCCGTCGTCCGCGGAGGAGTCGATTGCCGGATTCATCGAACACGAGCGCAGCTTCGTTCCAGGATGCGACTACTTCTCTAGGTTTCAATCTCAATCGCTTGATGCCTCCGCGAGAGAGGAATCTGTTGCATGGATTCTCAAGGTACAGGCATACTTTGGGTTTCAGCCGCTGACGGCGTATCTTTCCGTCAACTATATGGATCGGTTTTTGGATTCTGGGCGGTTGCCGCAAGCAAGTGGGTGGCCACTGCAACTTCTGTCCGTTGCCTGTTTGTCTTTAGCTGCAAAGATGGAGGAGCCTTTAGTTCCGCCCCTCGTGGATCTTCAGGTAGAAGGTGCCAAATACATCTTTGAACCGAAAACAATTCGTAGGATGGAACTGCTTGTTCTAGGTGCTTTGGATTGGAGACTAAGATCAGTCACGCCGTTCAACTTCCTCAGTTTCTTTGCATGCAAGCTCGATTCAAGTGGAACTCTTACTGGCTTCCTTATTTCACGAGCTACAGAAATCATCTTATCAAATATCCCAGAGGCTAGTTTTCTTGCCTACTGGCCATCGTGCATTGCTGCCGCCTCCATACTCTGTGCAGCGAATGAAATTCCTAATTGGTCTCTCGTCAAGCCTGACCATGCTGAGTCATGGTGCGAGGGGCTTAGAAAAGAGAAGATTATAGGTTGCTACCAGATCATGCGAGAATTCGTGACTAACAATAGCCAGACAAGGCCCCCCAAAGTGTTCCCACAGCTTCGAGTAACAACTAGGCTTGCAACAAAGTCAAGTATGTCATCATACTCATCGCCTTCCTCCTCCTCCTCCTCCTCATCACCTTACAAAAGGAGGAAATTAAATAACTGCTTGTGGGTAGATGATGATGACAAAAGGCACTCCGAGTGA 1008 0.4931 MSVSCTDYFPDSDLLCDEDTSGILSGESTECSFDLDSSPSSAEESIAGFIEHERSFVPGCDYFSRFQSQSLDASAREESVAWILKVQAYFGFQPLTAYLSVNYMDRFLDSGRLPQASGWPLQLLSVACLSLAAKMEEPLVPPLVDLQVEGAKYIFEPKTIRRMELLVLGALDWRLRSVTPFNFLSFFACKLDSSGTLTGFLISRATEIILSNIPEASFLAYWPSCIAAASILCAANEIPNWSLVKPDHAESWCEGLRKEKIIGCYQIMREFVTNNSQTRPPKVFPQLRVTTRLATKSSMSSYSSPSSSSSSSSPYKRRKLNNCLWVDDDDKRHSE 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1644 335 Pfam Cyclin, C-terminal domain 178 289 IPR004367 -
Prci5g1644 335 FunFam D2/4-type cyclin 59 176 - -
Prci5g1644 335 SMART Cyclin_C_2 178 315 IPR004367 -
Prci5g1644 335 SMART cyclin_7 81 169 IPR013763 -
Prci5g1644 335 ProSitePatterns Cyclins signature. 76 107 IPR006671 -
Prci5g1644 335 PANTHER CYCLINS 46 275 IPR039361 -
Prci5g1644 335 SUPERFAMILY Cyclin-like 41 175 IPR036915 -
Prci5g1644 335 CDD CYCLIN_AtCycD-like_rpt1 75 173 - -
Prci5g1644 335 Gene3D - 50 239 - -
Prci5g1644 335 Pfam Cyclin, N-terminal domain 48 175 IPR006671 -
Prci5g1644 335 SUPERFAMILY Cyclin-like 160 278 IPR036915 -
Prci5g1644 335 Gene3D - 59 176 - -
Prci5g1644 335 MobiDBLite consensus disorder prediction 295 316 - -
Prci5g1644 335 CDD CYCLIN_AtCycD-like_rpt2 178 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g1644 Prci-Chr5 35171465 35175255 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g1644 1 329 Core Cell Cycle Gene Families AT1G70210 63.964 1.49e-135 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g1644 K18810 - gmx:100775224 484.952