Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1630 ATGCCGACGAATACATCAAAATCGGAGAAGCGCGACAATGTGAAGCAGCTTCGGCGGGACCCCTATGAGGTTCTCGGCGTCTCTCTGAACTCAACAGATCAAGAAATTAAAACTGCTTACCGGAAATTGGCACTCAAATATCATCCTGACAAGAATGCTAATGATCCCAAAGCAGCGGATATGTTCAAAGAGGCCACCTTTTCATATAATATCTTGTCAGATCCTGAAAAACGCCGTCAGTATGACTCTTCTGGTTTTGAGGCTGTTGAATCAGATAACCAAGACTTGGAGTTGGATCTTTCGAGTTTAGGTGCTGTGAATACAATGTTTGCAGCACTTTTTAGTAAACTTGGGGTGCCAATTAAGACAACTGTATCAGCAACCGTTTTGGAAGAGGCACTTAATGGGGCAGTGATCATTCATCCACTTCCATTGGGGCTGCCTATATCTAAAAGGGTTGAGAAGCAATGTGCTCACTTTTATTCAGTTACATTATCAGAAGAAGAAGCACAGGTTGGATTTGTTTGCCGAGTGCAATCATCAGACAAAAGCAAGTTCAAGTTACTATATTTTGATCAAGAAGAGACTGGTGGACTAAGTCTTGCACTCCAGGAAGACAGTGCAAAAGCAGGGAGGGTAACTTCTGCGGGAATGTATTTTCTTGGGTTTCCTGTTTATCAGTTGGATCAAACCATGAATTCAACAGCTGCTGCTAAGGATCCTGATGCATCATTTTTCAGAAAGCTAGATGGGTTCCGACCATGTGAATTAACAGAACTAAAGGCCGGTACTCATGTATTTGCCGTTTATGGTGACAATTTTTTCAGAAGTGCAAGCTACACTATAGAAGGTTTATGTGCTGCGCCTTTTAGTCAAGAAAAAGAAAATCTGAGAAGTGTAGAAGACCAAATTTTATCTAAAAGGGCGGGCCTAACGAATTTTGAGTCTGAATACCGAGAGGTTCTGGCACAATTTACAGAGATGACAAGTAGATATACACAAGAAATGCAAGCGATTGATGAGCTACTTAAGCAAAGGAATGAAATACGTGCATCATATACTGTTGCTCCATTAAAACGAAGTATGACGAAGAGGAAGAGTAAAAGTTCTTCCAAGGAGGAACAAGAAGGTGGCCAAGCAAGAGAGAAGAGATATACAAGGGAACGACTGAGGAAGAAGAAATGGTATAACATCCACTTAAAAGCTGATAAGAGAAAAGCTTGCTAG 1227 0.4124 MPTNTSKSEKRDNVKQLRRDPYEVLGVSLNSTDQEIKTAYRKLALKYHPDKNANDPKAADMFKEATFSYNILSDPEKRRQYDSSGFEAVESDNQDLELDLSSLGAVNTMFAALFSKLGVPIKTTVSATVLEEALNGAVIIHPLPLGLPISKRVEKQCAHFYSVTLSEEEAQVGFVCRVQSSDKSKFKLLYFDQEETGGLSLALQEDSAKAGRVTSAGMYFLGFPVYQLDQTMNSTAAAKDPDASFFRKLDGFRPCELTELKAGTHVFAVYGDNFFRSASYTIEGLCAAPFSQEKENLRSVEDQILSKRAGLTNFESEYREVLAQFTEMTSRYTQEMQAIDELLKQRNEIRASYTVAPLKRSMTKRKSKSSSKEEQEGGQAREKRYTRERLRKKKWYNIHLKADKRKAC 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1630 408 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN) 6 407 - -
Prci5g1630 408 CDD DnaJ 20 74 IPR001623 -
Prci5g1630 408 SMART dnaj_3 19 77 IPR001623 -
Prci5g1630 408 PRINTS DnaJ domain signature 40 55 IPR001623 -
Prci5g1630 408 PRINTS DnaJ domain signature 22 40 IPR001623 -
Prci5g1630 408 PRINTS DnaJ domain signature 77 96 IPR001623 -
Prci5g1630 408 PRINTS DnaJ domain signature 57 77 IPR001623 -
Prci5g1630 408 FunFam Chaperone protein dnaJ 16 4 102 - -
Prci5g1630 408 ProSiteProfiles dnaJ domain profile. 20 85 IPR001623 -
Prci5g1630 408 SUPERFAMILY Chaperone J-domain 19 89 IPR036869 -
Prci5g1630 408 Gene3D DnaJ domain 4 103 IPR036869 -
Prci5g1630 408 MobiDBLite consensus disorder prediction 359 388 - -
Prci5g1630 408 ProSitePatterns Nt-dnaJ domain signature. 62 81 IPR018253 -
Prci5g1630 408 MobiDBLite consensus disorder prediction 367 385 - -
Prci5g1630 408 Pfam DnaJ domain 20 82 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g1630 Prci-Chr5 35091479 35094968 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g1630 5 83 C2H2 Transcription Factor Family AT1G74250 41.667 1.12e-10 61.6