Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1624 ATGGAGGACTGTGGTCTGTTGCCGGCAGATTCCGAAGAGGTTCATGTCTTGGCCGTCGATGACAGCCTCGTCGATCGGAAAGTCATCGAGCGCTTGCTCAGGATTTCAGCTTGTAAAGTTACTGCCGTGGACAGCGGAATGAGAGCTCTGCAATTCCTTGGACTCGACAGCCAGAAATCCGCCTCCGAATCAGACGGCTTTGATGGCTTAAAGGTAGATCTAATCATCACCGACTATTGCATGCCCGGAATGACCGGCTACGAATTACTCAAGAAAATCAAGGAGTCGTCCACTTTCAGAGAAATTCCGGTGGTGATTATGTCCTCTGAAAACGTCCTGCCGCGCATAGACAGGTGTTTGGAAGAAGGAGCAGAGGATTTCATAGTGAAGCCGGTGAAGTTATCAGACGTGAAGCGGTTAAGGGATTACATGACGACAAGAGAAGTTAAGGCGGGAATTCAGGACAGAGAAGGCGGCGTCAGGTTCACCAAAAGAAAGCTGACAGAATCCTCTGATCTGGATTCATCGCCGCCGTCCGTTACCTCCTCCTCCGCTCTGTCGTCGCCGCCATCTTCACCGTCGGATTCGCCTTCGCCTTCCCCGTCGTCGTCCCCTTCCCCTTCCCCGCACGATTCTCCAATCGATTGA 648 0.5231 MEDCGLLPADSEEVHVLAVDDSLVDRKVIERLLRISACKVTAVDSGMRALQFLGLDSQKSASESDGFDGLKVDLIITDYCMPGMTGYELLKKIKESSTFREIPVVIMSSENVLPRIDRCLEEGAEDFIVKPVKLSDVKRLRDYMTTREVKAGIQDREGGVRFTKRKLTESSDLDSSPPSVTSSSALSSPPSSPSDSPSPSPSSSPSPSPHDSPID 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1624 215 SUPERFAMILY CheY-like 14 140 IPR011006 -
Prci5g1624 215 MobiDBLite consensus disorder prediction 172 191 - -
Prci5g1624 215 PANTHER TWO-COMPONENT RESPONSE REGULATOR 14 165 IPR045279 GO:0009736
Prci5g1624 215 Gene3D - 14 185 - -
Prci5g1624 215 CDD REC_typeA_ARR 16 140 - -
Prci5g1624 215 ProSiteProfiles Response regulatory domain profile. 15 145 IPR001789 GO:0000160
Prci5g1624 215 SMART REC_2 14 141 IPR001789 GO:0000160
Prci5g1624 215 Pfam Response regulator receiver domain 16 137 IPR001789 GO:0000160
Prci5g1624 215 MobiDBLite consensus disorder prediction 160 215 - -
Prci5g1624 215 MobiDBLite consensus disorder prediction 192 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g1624 Prci-Chr5 34999031 35000488 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g1624 8 214 Response Regulator Gene Family AT1G59940 63.810 2.01e-79 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Prci5g1624 Response_reg 9.9e-22 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g1624 K14492 - fve:101297826 249.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci5g1624 5 34999031 35000488 Prci9g1617 9 28695299 28697829 ECH
Prci5g1624 5 34999031 35000488 Prci5g1624 5 34999031 35000488 ECH