Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1623 ATGGAGGACTGTGGTCTGTTGCCGGCAGATTCCGAAGAGGTTCATGTCTTGGCCGTCGATGACAGCCTCGTCGATCGGAAAGTCATCGAGCGCTTGCTCAGGATTTCAGCTTGTAAAGTTACTGCCGTGGACAGCGGAATGAGAGCTCTGCAATTCCTTGGACTCGACAGCCAGAAATCCGCCTCCGAATCAGACGGCTTTGATCAGGGCTTAAAGGTAGATCTAATCATCACCGACTATTGCATGCCCGGAATGACCGGCTACGAATTACTCAAGAAAATCAAGGAGTCGTCCACTTTCAGAGAAATTCCGGTGGTGATTATGTCCTCTGAAAACGTCCTGCCGCGCATAGACAGGTGTTTGGAAGAAGGAGCAGAGGATTTCATAGTGAAGCCGGTGAAGTTATCAGACGTGAAGCGGTTAAGGGATTACATGACGACAAGAGAAGTTAAGGCGGGAATTCAGGACAGAGAAGGCGGCGTCAGGTTCACCAAAAGAAAGCTGACAGAATCCTCTGATCTGGATTCATCGCCGCCGTCCGTTACCTCCTCCTCCGCTCTGTCGTCGCCGCCATCTTCACCGTCGGATTCGCCTTCGCCTTCCCCGTCGTCGTCCCCTTCCCCTTCCCCGCACGATTCTCCAATCGATTGA 651 0.5238 MEDCGLLPADSEEVHVLAVDDSLVDRKVIERLLRISACKVTAVDSGMRALQFLGLDSQKSASESDGFDQGLKVDLIITDYCMPGMTGYELLKKIKESSTFREIPVVIMSSENVLPRIDRCLEEGAEDFIVKPVKLSDVKRLRDYMTTREVKAGIQDREGGVRFTKRKLTESSDLDSSPPSVTSSSALSSPPSSPSDSPSPSPSSSPSPSPHDSPID 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1623 216 SMART REC_2 14 142 IPR001789 GO:0000160
Prci5g1623 216 MobiDBLite consensus disorder prediction 161 216 - -
Prci5g1623 216 MobiDBLite consensus disorder prediction 193 216 - -
Prci5g1623 216 Gene3D - 14 186 - -
Prci5g1623 216 PANTHER TWO-COMPONENT RESPONSE REGULATOR 14 166 IPR045279 GO:0009736
Prci5g1623 216 SUPERFAMILY CheY-like 14 141 IPR011006 -
Prci5g1623 216 MobiDBLite consensus disorder prediction 173 192 - -
Prci5g1623 216 CDD REC_typeA_ARR 16 141 - -
Prci5g1623 216 ProSiteProfiles Response regulatory domain profile. 15 146 IPR001789 GO:0000160
Prci5g1623 216 Pfam Response regulator receiver domain 16 138 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g1623 Prci-Chr5 34999031 35000492 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g1623 8 215 Response Regulator Gene Family AT1G59940 63.507 3.17e-78 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Prci5g1623 Response_reg 1.4e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g1623 K14492 - fve:101297826 244.973