Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1607 ATGAACTCCAAAGCACTCATTCACAACATAAACGTGAGCCCCATTTCGTTCATCATGAACTTCATCCTTCTCACCGCTTTAATCTTTCTCCTTTATTTTTCATCGCTTTCTGTTTCCATCGAGGATGACGTTGTTTGCCTCGAAGGTGTCAAGAACTCATTTTCCGACCCAAATGGAAAACTCAGCACTTGGAGCTTCACCAACACCTCCGTGTCCTCAATCTGCCAGCTCGTCGGTGTTTCTTGCTGGAACGAGAAGGAGACCCGCCTCATAAGCCTTCAGCTCCGTGACATGCAGCTAGCGGGAAGACTCCCTGAGTCGCTCAAGTATTGCCGAAGCCTCCAGACCCTCGTCCTCTCCGGTAACGCTCTCTCCGGTTCGATCCCTTCGTATATCTGTAGCTGGTTGCCTTATCTGGTCACCCTAGATCTCTCCAGTAACCAAATATCGGGTTCCATCCCACCCGAGATTGTGAATTGTAAGTTCCTGAATACACTTGTTCTAAATGATAACAAGCTATCGGGTTCGATCCCTTATGAACTGGGTCGGCTTGACCGATTGAAGAAGCTCTCTGTTGCCAATAACGATCTCTCGGGTTCTATTCCACCGGATTTGTCCAAATTTGACGCAGCTGATTTTGATGGCAACAGTGGGTTATGTGGGAAACCTATTGGATCAAAGTGTGGTGGATTGAGTCGTAAAAGTCTCGGGATTATTATTGCTGCTGGTGCTGTTGGAGCTTTGGGATCTTTAGTTGTGGGTTTCGCTCTCTGGTGGTGGTTCTTCCTGAGAATCAGTGAGCAAAAGAAAGAGTATAGTGGTTCTGGTGGTGGAAAGCAAGTGGGCGATTGGATTGAGTTGTTGAAGTCACACAAGCTTGCTCAAGTTTCTTTGTTCCAGAAACCCATCGTGAAAGTCAGATTAGCTGATTTGCTAATTGCTACCAACAGCTTCCACCCAGAAAATATTGTGATTTCTAGTAGAACAGGCGTCTCTTATAAGGCTGTTCTGCGAGATGGATCAGCTCTTGCCGTGAAGAGGCTTAATTCTTGTAAACTTGGTGAGAAACAATTCCGATCCGAGATGAACAGGTTGGGGCAGCTCAGACACCCCAATTTGGTACCTCTTTTGGGTTTCTGTTTGGTGGAAGAAGAGAAGCTTCTGGTGTACAAGCACATGTTCAATGGAACCTTGTACTCTCAGTTGCATAAAAATGGTCATGGTAATAATAGTCAGTATAGTTTTTTGGACTGGCCAACGAGACTCAGGATTGGGATAGGTGCTGCCAGAGGACTTGCTTGGCTTCACCATGCTTGTCAACCTCCCTATGTTCACCAGAACATCAGCTCAAATATTGTCCTTCTTGACTATGATTTTGAAGCTCGAATAACGGATTTTGGATTGGCAAGGCTCGTGGTTACTCGCGATCCCAATGATAGCTCCTTTGTGAATGGAGATCTGGGTGAGTTTGGGTATGTTGCTCCTGAGTATTCAAGTACCGTGGTTGCTTCCTTGAAAGGCGATGTTTATGGTTTTGGAGTAGTTCTTTTGGAATTGGTCACTGGGATGAAGCCAGTGGAAGTAAACACTGGAGGGGAAGGATTCAAAGGGAATTTAGTGGATTGGGTCAATTGGTTAACATTGACAGGAAGAACCAAAGAAGCCATAGATAAAGCATTGTTCAATGAAAATCCTGAACATGGGGATGAATTTACCCAGTTCATGAAGGTTGCCATATCTTGTGTTGTTTCTAGGCCTAAAGATAGACCTTCCATGTACCAAGTTTTCTCCTCTCTGAAGAGCATGGCTGAGAAACATGGTTTCGCTGATCAGTATGATGAATTCCCAGTTGTCTCTGGCAAAGAAGACTCTAATTACATTAAGAATTAG 1890 0.4492 MNSKALIHNINVSPISFIMNFILLTALIFLLYFSSLSVSIEDDVVCLEGVKNSFSDPNGKLSTWSFTNTSVSSICQLVGVSCWNEKETRLISLQLRDMQLAGRLPESLKYCRSLQTLVLSGNALSGSIPSYICSWLPYLVTLDLSSNQISGSIPPEIVNCKFLNTLVLNDNKLSGSIPYELGRLDRLKKLSVANNDLSGSIPPDLSKFDAADFDGNSGLCGKPIGSKCGGLSRKSLGIIIAAGAVGALGSLVVGFALWWWFFLRISEQKKEYSGSGGGKQVGDWIELLKSHKLAQVSLFQKPIVKVRLADLLIATNSFHPENIVISSRTGVSYKAVLRDGSALAVKRLNSCKLGEKQFRSEMNRLGQLRHPNLVPLLGFCLVEEEKLLVYKHMFNGTLYSQLHKNGHGNNSQYSFLDWPTRLRIGIGAARGLAWLHHACQPPYVHQNISSNIVLLDYDFEARITDFGLARLVVTRDPNDSSFVNGDLGEFGYVAPEYSSTVVASLKGDVYGFGVVLLELVTGMKPVEVNTGGEGFKGNLVDWVNWLTLTGRTKEAIDKALFNENPEHGDEFTQFMKVAISCVVSRPKDRPSMYQVFSSLKSMAEKHGFADQYDEFPVVSGKEDSNYIKN 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1607 629 Gene3D Ribonuclease Inhibitor 41 230 IPR032675 -
Prci5g1607 629 Gene3D Transferase(Phosphotransferase) domain 1 393 620 - -
Prci5g1607 629 Pfam Protein tyrosine and serine/threonine kinase 341 598 IPR001245 GO:0004672|GO:0006468
Prci5g1607 629 Pfam Leucine rich repeat N-terminal domain 41 83 IPR013210 -
Prci5g1607 629 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 393 621 - -
Prci5g1607 629 Pfam Leucine Rich repeat 137 151 IPR001611 GO:0005515
Prci5g1607 629 SUPERFAMILY Protein kinase-like (PK-like) 296 599 IPR011009 -
Prci5g1607 629 Gene3D Phosphorylase Kinase; domain 1 279 392 - -
Prci5g1607 629 ProSiteProfiles Protein kinase domain profile. 318 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g1607 629 SUPERFAMILY L domain-like 40 216 - -
Prci5g1607 629 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 279 392 - -
Prci5g1607 629 CDD STKc_IRAK 326 602 - -
Prci5g1607 629 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 76 596 - -
Prci5g1607 629 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 40 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g1607 Prci-Chr5 34838588 34840771 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g1607 21 624 Receptor kinase-like Gene Family AT1G27190 66.391 0.0 803
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Prci5g1607 PK_Tyr_Ser-Thr 2.2e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g1607 - - mdm:103425488 910.983