Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1596 ATGGGTGGACCTGGCGGAGTGGAGCCTCAGGCCCCGGACAAGCGTACCATTTTCTGCAATGATCGCAAGAACAAACTTCCCAGTCCATTCACGGGAAACTCGATATCAACTACAAAATATAACATTTTCACTTTCTTGCCAAAAGGGCTTTTTGAACAGTTCAGGCGGGTTGCTAATCTCTATTTTCTTTCAATCTCAATTTTAGCAGCAACACCAATCAGTCCTATATCTCCAATAACTAATGTGGTTCCTCTGTCTCTGGTGCTTCTTATCTCTCTTATTAAGGAAGCTTTTGAGGACTGGAAACGTCTTCAAAATGACAAGGTCATAAACAATAGAATGATAGATGTTTTGCAAGATCAAACATGGGAGTCCGTAGTCTGGAAAAATCTGCAGGTTGGAGACATTGTCAGGGTGAGTGTGGTTAAGCAGGATGGATTTTTCCCAGCAGATCTTCTTTTCCTGGCCAGTACAAATGCAGATGGTGTCTGCTATATTGAGACTGCTAATTTGGATGGGGAAACCAATCTCAAGATCAGGAAAGCATCGGAGAAGACTTGGGATTACCTGACTCCAGAGAAGGCATCTGAGTTTGAAGGTGAAGTTCAGTGTGAACAACCAAACAATTCATTGTATACCTTCACTGGGAATCTTATTATTCAAACACAAACACTACCTGTCAATCCCAACCAAATTTTGCTGCGAGGTTGCAGTCTCAAAAATACAGGGTATATTGTTGGAGTAGTTATTTTTACAGGGCATGAAACAAAGGTGATGATGAATTCCATGAATGTGCCTTCTAAAAGAAGTACATTGGAGAGGAAGTTAGACAAACTCATACTCGTTCTATTCACAACTCTCTTTGGAATTTGTTTTGTTGGAGCCATAGGCAGTGGCGTCTTTGTAAACAACAAATATTTCTATTTACGCCTTGATGTAGGTGGTGAGGGCTCAGGACAGTTCAACCCAAATAACAGATTTCTGGTTATTGTCCTAACTTTGTTTACTCTTATCACTCTATACTCACCTCTCATCCCTATTTCACTTTATGTGTCAATAGAGATGATCAAATTTATTCAGTCTACTCAATTTATCAACAAGGACTTGTGCATGTACCATAAGGAAACCAATACCCCAGCATTGGCCAGGACATCTAATCTAAATGAAGAACTTGGACAGGTGGAATACATCTTCTCTGACAAAACAGGAACTTTGACAAGAAACTTGATGGAGTTTTTTAAGTGTTCAATTGGAGAACAGGTCTATGGAACTGGTGTTACTGAAATTGAGAGGCAAATGGCTGAGCGTAATGGGATGAAAGTTGAGGAAACTAAATCAGACACTGCAGTGCAAGAGAGGGGCTTTAATTTTGATGATGATAGGCTTATGCAAGGAGCCTGGAGGAATGAGCCTAATCCTAACATTTGTAAGGAATTCTTCAGATGCCTTGCTATATGTCATACTGTACTTCCTGAGGGCGATGAGTCCCCAGATAAAGTCACGTATCAAGCAGCCTCACCTGATGAGGCTGCTTTGGTCATTGCTGCAAAGAACTTTGGTTTCTTCTTTTACAGACGCACACCAACAACGATATATGTTCGCGAATCACATGCTGAAAAGAAGGGTAAAATCCAAGATGTGCCTTATGAAATTTTGAATGTACTTGAATTTAACAGTACAAGGAAGCGCCAGTCTGTTATATGCCGTTATGCAGATGGGAAGCTTGTATTATACTGTAAGGGTGCTGATACAGTGATCTTCGAGAGATTGGCCAATGGTGCTGATGACATAAAGAAATTGACCAGGGAGTATTTGGAACAATTTGGAGCTGCTGGGTTACGTACATTATGCCTGGCCTACAAAGAATTACACCCTCATGTATATGAAAGTTGGAATGAGAAGTTCATCCAAGCCAAGTCATCTCTAAGTGATCGTGACAAGAAGTTGGATGAGGTGGCAGAACTTATAGAAACTGATCTGATTTTGATTGGTAGCACTGCCATAGAGGACAAGCTTCAAGAGGGAGTTCCAGCATGTATAGAGACTCTCCAAAGAGCTGGCATTAAAATTTGGGTGCTTACTGGAGACAAGATTGAAACAGCTATAAATATAGCCTATGCATGCAATTTAATAACCAATGAGATGAAAAAATTTACTATCAGCTCGGAAACTGATGCAATTAGAGAAGTCGAAGAAAGGGGTGACCCAGTGGAAATTACGCATTTTATTAGAGAAGAAGTGAAGAAAGAGTTGAAGAAGTCCCTTGAGGAAGCACAGAGCTATCTTCGCTCTCTAAATGGACAAAAATTAGCACTTGTAATTGATGGGAAAAGTCTAATGCATGCATTAGACCCAAGTTTAAGAGCGACGCTTCTGAATTTGGGTTTGAATTGTCATGCGGTTGTTTGCTGTCGAGTTTCTCCTTTACAAAAAGCACAGGTCACAAGGCTAGTCAAGAAAGGTGCACATAAAATAACGTTAAGTGTTGGCGATGGAGCCAATGATGTTAGCATGATTCAAGCTGCTCATGTTGGTGTTGGCGTAAGTGGGATGGAGGGGATGCAAGCAGTGATGGCTAGTGATTTTGCCGTTGCACAGTTTCGTTTCCTTGTAGATTTACTACTTGTCCATGGCCGTTGGTCATACCTTCGAGTATGCAAGGTTATTACATACTTCTTTTATAAGAATCTCACGTTCACTCTTACTCAGTTTTGGTTTACTTTCCAAACTGGGTTTTCTGGTCAGAGGTTCTATGATGACTGGTTTCAGTCATTATATAATGTGATCTTCACGGCACTGCCTGTAATTATTGTTGGACTATTTGACAAGGATGTCAGTGCATCTCTTTCCAGGAAGTATCCTGGACTTTACATGGAAGGAATTAGGAATGTCTTCTTCAAATGGAGTGTTGTGGCAACATGGGCCCTTTTTTCGGTCTACCAGTCTTTGATATTGTTCTATTTTGTGATTTTGTCGAGCTCAAGTGCTAAAAATTCAGTAGGCAAAACATTTGGACAGTGGGATGTCAGCACAATGGCCTATACATGTGTTATAGTAACTGTCAATGTACGACTTCTTATGATATGTAATTCGATCACAAGGTGGCACTTAATTGGTGTTGGTGGAAGTATATTAGCATGGTTTATTTTTGCCTTCATATATTCAGTGGTCAGACAGGAGAATATTTATTTTGTGATATATGTCCTAATGAGTACACCCTATTTCTACCTCACGCTTCTTCTTGTTCCCATTGCTGCCCTCTTGGGTGACTTCGTCTTCCAAGGGATTCAAAGATGGTTTTTCCCCTATGATTATCAGATTATTCAGGAAATTCACAGAGACGAACCAGATTGCGGCAACAGGACGCAGCTGCTGGAGGTGGGGACTCATCTTACACCATCAGAGGCAAGGAGCTATGCCATGTCTCAACTTCCTCGTGAGGTATCCAAGTACACAGGGTTTGCTTTTGATTCACCTTGCTATGAGTCCTTTTTCGCTTCCCAGTTCGGCGTGTATGCCCCGCATAAGGCATGGGATGTTGCTAAACGAGCTAGCAGGTTTCGAGCACCAAAGATTGGCCACAAAAAATAG 3591 0.4116 MGGPGGVEPQAPDKRTIFCNDRKNKLPSPFTGNSISTTKYNIFTFLPKGLFEQFRRVANLYFLSISILAATPISPISPITNVVPLSLVLLISLIKEAFEDWKRLQNDKVINNRMIDVLQDQTWESVVWKNLQVGDIVRVSVVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKASEKTWDYLTPEKASEFEGEVQCEQPNNSLYTFTGNLIIQTQTLPVNPNQILLRGCSLKNTGYIVGVVIFTGHETKVMMNSMNVPSKRSTLERKLDKLILVLFTTLFGICFVGAIGSGVFVNNKYFYLRLDVGGEGSGQFNPNNRFLVIVLTLFTLITLYSPLIPISLYVSIEMIKFIQSTQFINKDLCMYHKETNTPALARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGEQVYGTGVTEIERQMAERNGMKVEETKSDTAVQERGFNFDDDRLMQGAWRNEPNPNICKEFFRCLAICHTVLPEGDESPDKVTYQAASPDEAALVIAAKNFGFFFYRRTPTTIYVRESHAEKKGKIQDVPYEILNVLEFNSTRKRQSVICRYADGKLVLYCKGADTVIFERLANGADDIKKLTREYLEQFGAAGLRTLCLAYKELHPHVYESWNEKFIQAKSSLSDRDKKLDEVAELIETDLILIGSTAIEDKLQEGVPACIETLQRAGIKIWVLTGDKIETAINIAYACNLITNEMKKFTISSETDAIREVEERGDPVEITHFIREEVKKELKKSLEEAQSYLRSLNGQKLALVIDGKSLMHALDPSLRATLLNLGLNCHAVVCCRVSPLQKAQVTRLVKKGAHKITLSVGDGANDVSMIQAAHVGVGVSGMEGMQAVMASDFAVAQFRFLVDLLLVHGRWSYLRVCKVITYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTALPVIIVGLFDKDVSASLSRKYPGLYMEGIRNVFFKWSVVATWALFSVYQSLILFYFVILSSSSAKNSVGKTFGQWDVSTMAYTCVIVTVNVRLLMICNSITRWHLIGVGGSILAWFIFAFIYSVVRQENIYFVIYVLMSTPYFYLTLLLVPIAALLGDFVFQGIQRWFFPYDYQIIQEIHRDEPDCGNRTQLLEVGTHLTPSEARSYAMSQLPREVSKYTGFAFDSPCYESFFASQFGVYAPHKAWDVAKRASRFRAPKIGHKK 1196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1596 1196 NCBIfam HAD-IC family P-type ATPase 802 908 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci5g1596 1196 ProSitePatterns E1-E2 ATPases phosphorylation site. 400 406 IPR018303 -
Prci5g1596 1196 Gene3D - 95 262 - -
Prci5g1596 1196 Pfam Cation transport ATPase (P-type) 495 589 - -
Prci5g1596 1196 FunFam Phospholipid-transporting ATPase 91 263 - -
Prci5g1596 1196 Pfam Phospholipid-translocating ATPase N-terminal 17 81 IPR032631 -
Prci5g1596 1196 Gene3D - 659 869 IPR023214 -
Prci5g1596 1196 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 448 667 IPR023299 GO:0000166
Prci5g1596 1196 SUPERFAMILY Calcium ATPase, transmembrane domain M 32 1102 IPR023298 -
Prci5g1596 1196 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 14 1147 - -
Prci5g1596 1196 SFLD Haloacid Dehalogenase 380 880 - -
Prci5g1596 1196 NCBIfam phospholipid-translocating P-type ATPase 30 1110 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Prci5g1596 1196 FunFam Phospholipid-transporting ATPase 662 869 - -
Prci5g1596 1196 Pfam Phospholipid-translocating P-type ATPase C-terminal 857 1102 IPR032630 -
Prci5g1596 1196 SFLD p-type atpase 380 880 IPR044492 -
Prci5g1596 1196 SUPERFAMILY HAD-like 393 885 IPR036412 -
Prci5g1596 1196 Coils Coil 744 768 - -
Prci5g1596 1196 FunFam Phospholipid-transporting ATPase IC 395 407 - -
Prci5g1596 1196 FunFam Phospholipid-transporting ATPase 506 661 - -
Prci5g1596 1196 CDD P-type_ATPase_APLT_Dnf-like 32 989 - -
Prci5g1596 1196 Gene3D - 508 652 IPR023299 GO:0000166
Prci5g1596 1196 SUPERFAMILY Calcium ATPase, transduction domain A 112 259 IPR008250 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g1596 Prci-Chr5 34772716 34786437 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g1596 5 1195 Primary Pumps ATPases AT1G59820 74.687 0.0 1904
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g1596 K14802 - gmx:100815547 1982.61