Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1595 ATGGGTGGACCTGGCGGAGTGGAGCCTCAGGCCCCGGACAAGCGTACCATTTTCTGCAATGATCGCAAGAACAAACTTCCCAGTCCATTCACGGGAAACTCGATATCAACTACAAAATATAACATTTTCACTTTCTTGCCAAAAGGGCTTTTTGAACAGTTCAGGCGGGTTGCTAATCTCTATTTTCTTTCAATCTCAATTTTAGCAGCAACACCAATCAGTCCTATATCTCCAATAACTAATGTGGTTCCTCTGTCTCTGGTGCTTCTTATCTCTCTTATTAAGGAAGCTTTTGAGGACTGGAAACGTCTTCAAAATGACAAGGTCATAAACAATAGAATGATAGATGTTTTGCAAGATCAAACATGGGAGTCCGTAGTCTGGAAAAATCTGCAGGTTGGAGACATTGTCAGGGTGAGTGTGCAGGTTAAGCAGGATGGATTTTTCCCAGCAGATCTTCTTTTCCTGGCCAGTACAAATGCAGATGGTGTCTGCTATATTGAGACTGCTAATTTGGATGGGGAAACCAATCTCAAGATCAGGAAAGCATCGGAGAAGACTTGGGATTACCTGACTCCAGAGAAGGCATCTGAGTTTGAAGGTGAAGTTCAGTGTGAACAACCAAACAATTCATTGTATACCTTCACTGGGAATCTTATTATTCAAACACAAACACTACCTGTCAATCCCAACCAAATTTTGCTGCGAGGTTGCAGTCTCAAAAATACAGGGTATATTGTTGGAGTAGTTATTTTTACAGGGCATGAAACAAAGGTGATGATGAATTCCATGAATGTGCCTTCTAAAAGAAGTACATTGGAGAGGAAGTTAGACAAACTCATACTCGTTCTATTCACAACTCTCTTTGGAATTTGTTTTGTTGGAGCCATAGGCAGTGGCGTCTTTGTAAACAACAAATATTTCTATTTACGCCTTGATGTAGGTGGTGAGGGCTCAGGACAGTTCAACCCAAATAACAGATTTCTGATGATCAAATTTATTCAGTCTACTCAATTTATCAACAAGGACTTGTGCATGTACCATAAGGAAACCAATACCCCAGCATTGGCCAGGACATCTAATCTAAATGAAGAACTTGGACAGGTGGAATACATCTTCTCTGACAAAACAGGAACTTTGACAAGAAACTTGATGGAGTTTTTTAAGTGTTCAATTGGAGAACAGGTCTATGGAACTGGTGTTACTGAAATTGAGAGGCAAATGGCTGAGCGTAATGGGATGAAAGTTGAGGAAACTAAATCAGACACTGCAGTGCAAGAGAGGGGCTTTAATTTTGATGATGATAGGCTTATGCAAGGAGCCTGGAGGAATGAGCCTAATCCTAACATTTGTAAGGAATTCTTCAGATGCCTTGCTATATGTCATACTGTACTTCCTGAGGGCGATGAGTCCCCAGATAAAGTCACGTATCAAGCAGCCTCACCTGATGAGGCTGCTTTGGTCATTGCTGCAAAGAACTTTGGTTTCTTCTTTTACAGACGCACACCAACAACGATATATGTTCGCGAATCACATGCTGAAAAGAAGGGTAAAATCCAAGATGTGCCTTATGAAATTTTGAATGTACTTGAATTTAACAGTACAAGGAAGCGCCAGTCTGTTATATGCCGTTATGCAGATGGGAAGCTTGTATTATACTGTAAGGGTGCTGATACAGTGATCTTCGAGAGATTGGCCAATGGTGCTGATGACATAAAGAAATTGACCAGGGAGTATTTGGAACAATTTGGAGCTGCTGGGTTACGTACATTATGCCTGGCCTACAAAGAATTACACCCTCATGTATATGAAAGTTGGAATGAGAAGTTCATCCAAGCCAAGTCATCTCTAAGTGATCGTGACAAGAAGTTGGATGAGGTGGCAGAACTTATAGAAACTGATCTGATTTTGATTGGTAGCACTGCCATAGAGGACAAGCTTCAAGAGGGAGTTCCAGCATGTATAGAGACTCTCCAAAGAGCTGGCATTAAAATTTGGGTGCTTACTGGAGACAAGATTGAAACAGCTATAAATATAGCCTATGCATGCAATTTAATAACCAATGAGATGAAAAAATTTACTATCAGCTCGGAAACTGATGCAATTAGAGAAGTCGAAGAAAGGGGTGACCCAGTGGAAATTACGCATTTTATTAGAGAAGAAGTGAAGAAAGAGTTGAAGAAGTCCCTTGAGGAAGCACAGAGCTATCTTCGCTCTCTAAATGGACAAAAATTAGCACTTGTAATTGATGGGAAAAGTCTAATGCATGCATTAGACCCAAGTTTAAGAGCGACGCTTCTGAATTTGGGTTTGAATTGTCATGCGGTTGTTTGCTGTCGAGTTTCTCCTTTACAAAAAGCACAGGTCACAAGGCTAGTCAAGAAAGGTGCACATAAAATAACGTTAAGTGTTGGCGATGGAGCCAATGATGTTAGCATGATTCAAGCTGCTCATGTTGGTGTTGGCGTAAGTGGGATGGAGGGGATGCAAGCAGTGATGGCTAGTGATTTTGCCGTTGCACAGTTTCGTTTCCTTGTAGATTTACTACTTGTCCATGGCCGTTGGTCATACCTTCGAGTATGCAAGGTTATTACATACTTCTTTTATAAGAATCTCACGTTCACTCTTACTCAGTTTTGGTTTACTTTCCAAACTGGGTTTTCTGGTCAGAGGTTCTATGATGACTGGTTTCAGTCATTATATAATGTGATCTTCACGGCACTGCCTGTAATTATTGTTGGACTATTTGACAAGGATGTCAGTGCATCTCTTTCCAGGAAGTATCCTGGACTTTACATGGAAGGAATTAGGAATGTCTTCTTCAAATGGAGTGTTGTGGCAACATGGGCCCTTTTTTCGGTCTACCAGTCTTTGATATTGTTCTATTTTGTGATTTTGTCGAGCTCAAGTGCTAAAAATTCAGTAGGCAAAACATTTGGACAGTGGGATGTCAGCACAATGGCCTATACATGTGTTATAGTAACTGTCAATGTACGACTTCTTATGATATGTAATTCGATCACAAGGTGGCACTTAATTGGTGTTGGTGGAAGTATATTAGCATGGTTTATTTTTGCCTTCATATATTCAGTGGTCAGACAGGAGAATATTTATTTTGTGATATATGTCCTAATGAGTACACCCTATTTCTACCTCACGCTTCTTCTTGTTCCCATTGCTGCCCTCTTGGGTGACTTCGTCTTCCAAGGGATTCAAAGATGGTTTTTCCCCTATGATTATCAGATTATTCAGGAAATTCACAGAGACGAACCAGATTGCGGCAACAGGACGCAGCTGCTGGAGGTGGGGACTCATCTTACACCATCAGAGGCAAGGAGCTATGCCATGTCTCAACTTCCTCGTGAGGTATCCAAGTACACAGGGTTTGCTTTTGATTCACCTTGCTATGAGTCCTTTTTCGCTTCCCAGTTCGGCGTGTATGCCCCGCATAAGGCATGGGATGTTGCTAAACGAGCTAGCAGGTTTCGAGCACCAAAGATTGGCCACAAAAAATAG 3516 0.4133 MGGPGGVEPQAPDKRTIFCNDRKNKLPSPFTGNSISTTKYNIFTFLPKGLFEQFRRVANLYFLSISILAATPISPISPITNVVPLSLVLLISLIKEAFEDWKRLQNDKVINNRMIDVLQDQTWESVVWKNLQVGDIVRVSVQVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKASEKTWDYLTPEKASEFEGEVQCEQPNNSLYTFTGNLIIQTQTLPVNPNQILLRGCSLKNTGYIVGVVIFTGHETKVMMNSMNVPSKRSTLERKLDKLILVLFTTLFGICFVGAIGSGVFVNNKYFYLRLDVGGEGSGQFNPNNRFLMIKFIQSTQFINKDLCMYHKETNTPALARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGEQVYGTGVTEIERQMAERNGMKVEETKSDTAVQERGFNFDDDRLMQGAWRNEPNPNICKEFFRCLAICHTVLPEGDESPDKVTYQAASPDEAALVIAAKNFGFFFYRRTPTTIYVRESHAEKKGKIQDVPYEILNVLEFNSTRKRQSVICRYADGKLVLYCKGADTVIFERLANGADDIKKLTREYLEQFGAAGLRTLCLAYKELHPHVYESWNEKFIQAKSSLSDRDKKLDEVAELIETDLILIGSTAIEDKLQEGVPACIETLQRAGIKIWVLTGDKIETAINIAYACNLITNEMKKFTISSETDAIREVEERGDPVEITHFIREEVKKELKKSLEEAQSYLRSLNGQKLALVIDGKSLMHALDPSLRATLLNLGLNCHAVVCCRVSPLQKAQVTRLVKKGAHKITLSVGDGANDVSMIQAAHVGVGVSGMEGMQAVMASDFAVAQFRFLVDLLLVHGRWSYLRVCKVITYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTALPVIIVGLFDKDVSASLSRKYPGLYMEGIRNVFFKWSVVATWALFSVYQSLILFYFVILSSSSAKNSVGKTFGQWDVSTMAYTCVIVTVNVRLLMICNSITRWHLIGVGGSILAWFIFAFIYSVVRQENIYFVIYVLMSTPYFYLTLLLVPIAALLGDFVFQGIQRWFFPYDYQIIQEIHRDEPDCGNRTQLLEVGTHLTPSEARSYAMSQLPREVSKYTGFAFDSPCYESFFASQFGVYAPHKAWDVAKRASRFRAPKIGHKK 1171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1595 1171 Coils Coil 719 743 - -
Prci5g1595 1171 FunFam Phospholipid-transporting ATPase IC 370 382 - -
Prci5g1595 1171 Pfam Phospholipid-translocating ATPase N-terminal 17 81 IPR032631 -
Prci5g1595 1171 SUPERFAMILY Calcium ATPase, transduction domain A 112 260 IPR008250 -
Prci5g1595 1171 SFLD C1.7: P-type atpase like 355 855 - -
Prci5g1595 1171 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 14 1122 - -
Prci5g1595 1171 SUPERFAMILY Calcium ATPase, transmembrane domain M 32 1077 IPR023298 -
Prci5g1595 1171 NCBIfam phospholipid-translocating P-type ATPase 30 1085 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Prci5g1595 1171 FunFam Phospholipid-transporting ATPase 91 264 - -
Prci5g1595 1171 SFLD p-type atpase 355 855 IPR044492 -
Prci5g1595 1171 FunFam Phospholipid-transporting ATPase 481 636 - -
Prci5g1595 1171 Pfam Phospholipid-translocating P-type ATPase C-terminal 832 1077 IPR032630 -
Prci5g1595 1171 CDD P-type_ATPase_APLT_Dnf-like 32 964 - -
Prci5g1595 1171 ProSitePatterns E1-E2 ATPases phosphorylation site. 375 381 IPR018303 -
Prci5g1595 1171 Gene3D - 95 263 - -
Prci5g1595 1171 Gene3D - 634 844 IPR023214 -
Prci5g1595 1171 FunFam Phospholipid-transporting ATPase 637 844 - -
Prci5g1595 1171 Pfam Cation transport ATPase (P-type) 470 564 - -
Prci5g1595 1171 SUPERFAMILY HAD-like 368 860 IPR036412 -
Prci5g1595 1171 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 423 642 IPR023299 GO:0000166
Prci5g1595 1171 Gene3D - 483 627 IPR023299 GO:0000166
Prci5g1595 1171 NCBIfam HAD-IC family P-type ATPase 777 883 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g1595 Prci-Chr5 34772716 34786437 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g1595 5 1170 Primary Pumps ATPases AT1G59820 73.764 0.0 1858