Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1594 ATGGGTGGACCTGGCGGAGTGGAGCCTCAGGCCCCGGACAAGCGTACCATTTTCTGCAATGATCGCAAGAACAAACTTCCCAGTCCATTCACGGGAAACTCGATATCAACTACAAAATATAACATTTTCACTTTCTTGCCAAAAGGGCTTTTTGAACAGTTCAGGCGGGTTGCTAATCTCTATTTTCTTTCAATCTCAATTTTAGCAGCAACACCAATCAGTCCTATATCTCCAATAACTAATGTGGTTCCTCTGTCTCTGGTGCTTCTTATCTCTCTTATTAAGGAAGCTTTTGAGGACTGGAAACGTCTTCAAAATGACAAGGTCATAAACAATAGAATGATAGATGTTTTGCAAGATCAAACATGGGAGTCCGTAGTCTGGAAAAATCTGCAGGTTGGAGACATTGTCAGGGTGAGTGTGCAGGTTAAGCAGGATGGATTTTTCCCAGCAGATCTTCTTTTCCTGGCCAGTACAAATGCAGATGGTGTCTGCTATATTGAGACTGCTAATTTGGATGGGGAAACCAATCTCAAGATCAGGAAAGCATCGGAGAAGACTTGGGATTACCTGACTCCAGAGAAGGCATCTGAGTTTGAAGGTGAAGTTCAGTGTGAACAACCAAACAATTCATTGTATACCTTCACTGGGAATCTTATTATTCAAACACAAACACTACCTGTCAATCCCAACCAAATTTTGCTGCGAGGTTGCAGTCTCAAAAATACAGGGTATATTGTTGGAGTAGTTATTTTTACAGGGCATGAAACAAAGGTGATGATGAATTCCATGAATGTGCCTTCTAAAAGAAGTACATTGGAGAGGAAGTTAGACAAACTCATACTCGTTCTATTCACAACTCTCTTTGGAATTTGTTTTGTTGGAGCCATAGGCAGTGGCGTCTTTGTAAACAACAAATATTTCTATTTACGCCTTGATGTAGGTGGTGAGGGCTCAGGACAGTTCAACCCAAATAACAGATTTCTGGTTATTGTCCTAACTTTGTTTACTCTTATCACTCTATACTCACCTCTCATCCCTATTTCACTTTATGTGTCAATAGAGATGATCAAATTTATTCAGTCTACTCAATTTATCAACAAGGACTTGTGCATGTACCATAAGGAAACCAATACCCCAGCATTGGCCAGGACATCTAATCTAAATGAAGAACTTGGACAGGTGGAATACATCTTCTCTGACAAAACAGGAACTTTGACAAGAAACTTGATGGAGTTTTTTAAGTGTTCAATTGGAGAACAGGTCTATGGAACTGGTGTTACTGAAATTGAGAGGCAAATGGCTGAGCGTAATGGGATGAAAGTTGAGGAAACTAAATCAGACACTGCAGTGCAAGAGAGGGGCTTTAATTTTGATGATGATAGGCTTATGCAAGGAGCCTGGAGGAATGAGCCTAATCCTAACATTTGTAAGGAATTCTTCAGATGCCTTGCTATATGTCATACTGTACTTCCTGAGGGCGATGAGTCCCCAGATAAAGTCACGTATCAAGCAGCCTCACCTGATGAGGCTGCTTTGGTCATTGCTGCAAAGAACTTTGGTTTCTTCTTTTACAGACGCACACCAACAACGATATATGTTCGCGAATCACATGCTGAAAAGAAGGGTAAAATCCAAGATGTGCCTTATGAAATTTTGAATGTACTTGAATTTAACAGTACAAGGAAGCGCCAGTCTGTTATATGCCGTTATGCAGATGGGAAGCTTGTATTATACTGTAAGGGTGCTGATACAGTGATCTTCGAGAGATTGGCCAATGGTGCTGATGACATAAAGAAATTGACCAGGGAGTATTTGGAACAATTTGGAGCTGCTGGGTTACGTACATTATGCCTGGCCTACAAAGAATTACACCCTCATGTATATGAAAGTTGGAATGAGAAGTTCATCCAAGCCAAGTCATCTCTAAGTGATCGTGACAAGAAGTTGGATGAGGTGGCAGAACTTATAGAAACTGATCTGATTTTGATTGGTAGCACTGCCATAGAGGACAAGCTTCAAGAGGGAGTTCCAGCATGTATAGAGACTCTCCAAAGAGCTGGCATTAAAATTTGGGTGCTTACTGGAGACAAGATTGAAACAGCTATAAATATAGCCTATGCATGCAATTTAATAACCAATGAGATGAAAAAATTTACTATCAGCTCGGAAACTGATGCAATTAGAGAAGTCGAAGAAAGGGGTGACCCAGTGGAAATTACGCATTTTATTAGAGAAGAAGTGAAGAAAGAGTTGAAGAAGTCCCTTGAGGAAGCACAGAGCTATCTTCGCTCTCTAAATGGACAAAAATTAGCACTTGTAATTGATGGGAAAAGTCTAATGCATGCATTAGACCCAAGTTTAAGAGCGACGCTTCTGAATTTGGGTTTGAATTGTCATGCGGTTGTTTGCTGTCGAGTTTCTCCTTTACAAAAAGCACAGGTCACAAGGCTAGTCAAGAAAGGTGCACATAAAATAACGTTAAGTGTTGGCGATGGAGCCAATGATGTTAGCATGATTCAAGCTGCTCATGTTGGTGTTGGCGTAAGTGGGATGGAGGGGATGCAAGCAGTGATGGCTAGTGATTTTGCCGTTGCACAGTTTCGTTTCCTTGTAGATTTACTACTTGTCCATGGCCGTTGGTCATACCTTCGAGTATGCAAGGTTATTACATACTTCTTTTATAAGAATCTCACGTTCACTCTTACTCAGTTTTGGTTTACTTTCCAAACTGGGTTTTCTGGTCAGAGGTTCTATGATGACTGGTTTCAGTCATTATATAATGTGATCTTCACGGCACTGCCTGTAATTATTGTTGGACTATTTGACAAGGATGTCAGTGCATCTCTTTCCAGGAAGTATCCTGGACTTTACATGGAAGGAATTAGGAATGTCTTCTTCAAATGGAGTGTTGTGGCAACATGGGCCCTTTTTTCGGTCTACCAGTCTTTGATATTGTTCTATTTTGTGATTTTGTCGAGCTCAAGTGCTAAAAATTCAGTAGGCAAAACATTTGGACAGTGGGATGTCAGCACAATGGCCTATACATGTGTTATAGTAACTGTCAATGTACGACTTCTTATGATATGTAATTCGATCACAAGGTGGCACTTAATTGGTGTTGGTGGAAGTATATTAGCATGGTTTATTTTTGCCTTCATATATTCAGTGGTCAGACAGGAGAATATTTATTTTGTGATATATGTCCTAATGAGTACACCCTATTTCTACCTCACGCTTCTTCTTGTTCCCATTGCTGCCCTCTTGGGTGACTTCGTCTTCCAAGGGATTCAAAGATGGTTTTTCCCCTATGATTATCAGATTATTCAGGAAATTCACAGAGACGAACCAGATTGCGGCAACAGGACGCAGCTGCTGGAGGTGGGGACTCATCTTACACCATCAGAGGCAAGGAGCTATGCCATGTCTCAACTTCCTCGTGAGGTATCCAAGTACACAGGGTTTGCTTTTGATTCACCTTGCTATGAGTCCTTTTTCGCTTCCCAGTTCGGCGTGTATGCCCCGCATAAGGCATGGGATGTTGCTAAACGAGCTAGCAGGTTTCGAGCACCAAAGATTGGCCACAAAAAATAG 3594 0.4118 MGGPGGVEPQAPDKRTIFCNDRKNKLPSPFTGNSISTTKYNIFTFLPKGLFEQFRRVANLYFLSISILAATPISPISPITNVVPLSLVLLISLIKEAFEDWKRLQNDKVINNRMIDVLQDQTWESVVWKNLQVGDIVRVSVQVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKASEKTWDYLTPEKASEFEGEVQCEQPNNSLYTFTGNLIIQTQTLPVNPNQILLRGCSLKNTGYIVGVVIFTGHETKVMMNSMNVPSKRSTLERKLDKLILVLFTTLFGICFVGAIGSGVFVNNKYFYLRLDVGGEGSGQFNPNNRFLVIVLTLFTLITLYSPLIPISLYVSIEMIKFIQSTQFINKDLCMYHKETNTPALARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGEQVYGTGVTEIERQMAERNGMKVEETKSDTAVQERGFNFDDDRLMQGAWRNEPNPNICKEFFRCLAICHTVLPEGDESPDKVTYQAASPDEAALVIAAKNFGFFFYRRTPTTIYVRESHAEKKGKIQDVPYEILNVLEFNSTRKRQSVICRYADGKLVLYCKGADTVIFERLANGADDIKKLTREYLEQFGAAGLRTLCLAYKELHPHVYESWNEKFIQAKSSLSDRDKKLDEVAELIETDLILIGSTAIEDKLQEGVPACIETLQRAGIKIWVLTGDKIETAINIAYACNLITNEMKKFTISSETDAIREVEERGDPVEITHFIREEVKKELKKSLEEAQSYLRSLNGQKLALVIDGKSLMHALDPSLRATLLNLGLNCHAVVCCRVSPLQKAQVTRLVKKGAHKITLSVGDGANDVSMIQAAHVGVGVSGMEGMQAVMASDFAVAQFRFLVDLLLVHGRWSYLRVCKVITYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTALPVIIVGLFDKDVSASLSRKYPGLYMEGIRNVFFKWSVVATWALFSVYQSLILFYFVILSSSSAKNSVGKTFGQWDVSTMAYTCVIVTVNVRLLMICNSITRWHLIGVGGSILAWFIFAFIYSVVRQENIYFVIYVLMSTPYFYLTLLLVPIAALLGDFVFQGIQRWFFPYDYQIIQEIHRDEPDCGNRTQLLEVGTHLTPSEARSYAMSQLPREVSKYTGFAFDSPCYESFFASQFGVYAPHKAWDVAKRASRFRAPKIGHKK 1197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1594 1197 CDD P-type_ATPase_APLT_Dnf-like 32 990 - -
Prci5g1594 1197 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 14 1148 - -
Prci5g1594 1197 FunFam Phospholipid-transporting ATPase 663 870 - -
Prci5g1594 1197 SUPERFAMILY HAD-like 394 886 IPR036412 -
Prci5g1594 1197 Pfam Cation transport ATPase (P-type) 496 590 - -
Prci5g1594 1197 Gene3D - 95 263 - -
Prci5g1594 1197 Pfam Phospholipid-translocating ATPase N-terminal 17 81 IPR032631 -
Prci5g1594 1197 Pfam Phospholipid-translocating P-type ATPase C-terminal 858 1103 IPR032630 -
Prci5g1594 1197 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 449 668 IPR023299 GO:0000166
Prci5g1594 1197 ProSitePatterns E1-E2 ATPases phosphorylation site. 401 407 IPR018303 -
Prci5g1594 1197 NCBIfam phospholipid-translocating P-type ATPase 30 1111 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Prci5g1594 1197 SFLD Haloacid Dehalogenase 381 881 - -
Prci5g1594 1197 Coils Coil 745 769 - -
Prci5g1594 1197 Gene3D - 660 870 IPR023214 -
Prci5g1594 1197 FunFam Phospholipid-transporting ATPase 91 264 - -
Prci5g1594 1197 FunFam Phospholipid-transporting ATPase IC 396 408 - -
Prci5g1594 1197 SUPERFAMILY Calcium ATPase, transmembrane domain M 32 1103 IPR023298 -
Prci5g1594 1197 FunFam Phospholipid-transporting ATPase 507 662 - -
Prci5g1594 1197 SFLD p-type atpase 381 881 IPR044492 -
Prci5g1594 1197 SUPERFAMILY Calcium ATPase, transduction domain A 112 260 IPR008250 -
Prci5g1594 1197 NCBIfam HAD-IC family P-type ATPase 803 909 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci5g1594 1197 Gene3D - 509 653 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g1594 Prci-Chr5 34772716 34786437 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g1594 5 1196 Primary Pumps ATPases AT1G59820 74.624 0.0 1904
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g1594 K14802 - gmx:100815547 1982.22