Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1593 ATGGGTGGACCTGGCGGAGTGGAGCCTCAGGCCCCGGACAAGCGTACCATTTTCTGCAATGATCGCAAGAACAAACTTCCCAGTCCATTCACGGGAAACTCGATATCAACTACAAAATATAACATTTTCACTTTCTTGCCAAAAGGGCTTTTTGAACAGTTCAGGCGGGTTGCTAATCTCTATTTTCTTTCAATCTCAATTTTAGCAGCAACACCAATCAGTCCTATATCTCCAATAACTAATGTGGTTCCTCTGTCTCTGGTGCTTCTTATCTCTCTTATTAAGGAAGCTTTTGAGGACTGGAAACGTCTTCAAAATGACAAGGTCATAAACAATAGAATGATAGATGTTTTGCAAGATCAAACATGGGAGTCCGTAGTCTGGAAAAATCTGCAGGTTGGAGACATTGTCAGGGTGAGTGTGCAGGTTAAGCAGGATGGATTTTTCCCAGCAGATCTTCTTTTCCTGGCCAGTACAAATGCAGATGGTGTCTGCTATATTGAGACTGCTAATTTGGATGGGGAAACCAATCTCAAGATCAGGAAAGCATCGGAGAAGACTTGGGATTACCTGACTCCAGAGAAGGCATCTGAGTTTGAAGGTGAAGTTCAGTGTGAACAACCAAACAATTCATTGTATACCTTCACTGGGAATCTTATTATTCAAACACAAACACTACCTGTCAATCCCAACCAAATTTTGCTGCGAGGTTGCAGTCTCAAAAATACAGGGTATATTGTTGGAGTAGTTATTTTTACAGGGCATGAAACAAAGGTGATGATGAATTCCATGAATGTGCCTTCTAAAAGAAGTACATTGGAGAGGAAGTTAGACAAACTCATACTCGTTCTATTCACAACTCTCTTTGGAATTTGTTTTGTTGGAGCCATAGGCAGTGGCGTCTTTGTAAACAACAAATATTTCTATTTACGCCTTGATGTAGGTGGTGAGGGCTCAGGACAGTTCAACCCAAATAACAGATTTCTGGTTATTGTCCTAACTTTGTTTACTCTTATCACTCTATACTCACCTCTCATCCCTATTTCACTTTATGTGTCAATAGAGATGATCAAATTTATTCAGTCTACTCAATTTATCAACAAGGACTTGTGCATGTACCATAAGGAAACCAATACCCCAGCATTGGCCAGGACATCTAATCTAAATGAAGAACTTGGACAGGTGGAATACATCTTCTCTGACAAAACAGGAACTTTGACAAGAAACTTGATGGAGTTTTTTAAGTGTTCAATTGGAGAACAGGTCTATGGAACTGGTGTTACTGAAATTGAGAGGCAAATGGCTGAGCGTAATGGGATGAAAGTTGAGGAAACTAAATCAGACACTGCAGTGCAAGAGAGGGGCTTTAATTTTGATGATGATAGGCTTATGCAAGGAGCCTGGAGGAATGAGCCTAATCCTAACATTTGTAAGGAATTCTTCAGATGCCTTGCTATATGTCATACTGTACTTCCTGAGGGCGATGAGTCCCCAGATAAAGTCACGTATCAAGCAGCCTCACCTGATGAGGCTGCTTTGGTCATTGCTGCAAAGAACTTTGGTTTCTTCTTTTACAGACGCACACCAACAACGATATATGTTCGCGAATCACATGCTGAAAAGAAGGGTAAAATCCAAGATGTGCCTTATGAAATTTTGAATGTACTTGAATTTAACAGTACAAGGAAGCGCCAGTCTGTTATATGCCGTTATGCAGATGGGAAGCTTGTATTATACTGTAAGGGTGCTGATACAGTGATCTTCGAGAGATTGGCCAATGGTGCTGATGACATAAAGAAATTGACCAGGGAGTATTTGGAACAATTTGGAGCTGCTGGGTTACGTACATTATGCCTGGCCTACAAAGAATTACACCCTCATGTATATGAAAGTTGGAATGAGAAGTTCATCCAAGCCAAGTCATCTCTAAGTGATCGTGACAAGAAGTTGGATGAGGTGGCAGAACTTATAGAAACTGATCTGATTTTGATTGGTAGCACTGCCATAGAGGACAAGCTTCAAGAGGGAGTTCCAGCATGTATAGAGACTCTCCAAAGAGCTGGCATTAAAATTTGGGTGCTTACTGGAGACAAGATTGAAACAGCTATAAATATAGCCTATGCATGCAATTTAATAACCAATGAGATGAAAAAATTTACTATCAGCTCGGAAACTGATGCAATTAGAGAAGTCGAAGAAAGGGGTGACCCAGTGGAAATTACGCATTTTATTAGAGAAGAAGTGAAGAAAGAGTTGAAGAAGTCCCTTGAGGAAGCACAGAGCTATCTTCGCTCTCTAAATGGACAAAAATTAGCACTTGTAATTGATGGGAAAAGTCTAATGCATGCATTAGACCCAAGTTTAAGAGCGACGCTTCTGAATTTGGGTTTGAATTGTCATGCGGTTGTTTGCTGTCGAGTTTCTCCTTTACAAAAAGCACAGGTCACAAGGCTAGTCAAGAAAGGTGCACATAAAATAACGTTAAGTGTTGGCGATGGAGCCAATGATGTTAGCATGATTCAAGCTGCTCATGTTGGTGTTGGCGTAAGTGGGATGGAGGGGATGCAAGCAGTGATGGCTAGTGATTTTGCCGTTGCACAGTTTCGTTTCCTTGTAGATTTACTACTTGTCCATGGCCGTTGGTCATACCTTCGAGTATGCAAGGTTATTACATACTTCTTTTATAAGAATCTCACGTTCACTCTTACTCAGTTTTGGTTTACTTTCCAAACTGGGTTTTCTGGTCAGAGGTTCTATGATGACTGGTTTCAGTCATTATATAATGTGATCTTCACGGCACTGCCTGTAATTATTGTTGGACTATTTGACAAGGATGTCAGTGCATCTCTTTCCAGGAAGTATCCTGGACTTTACATGGAAGGAATTAGGAATGTCTTCTTCAAATGGAGTGTTGTGGCAACATGGGCCCTTTTTTCGGTCTACCAGTCTTTGATATTGTTCTATTTTGTGATTTTGTCGAGCTCAAGTGCTAAAAATTCAGTAGGCAAAACATTTGGACAGTGGGATGTCAGCACAATGGCCTATACATGTGTTATAGTAACTGTCAATGTACGACTTCTTATGATATGTAATTCGATCACAAGGTGGCACTTAATTGGTGTTGGTGGAAGTATATTAGCATGGTTTATTTTTGCCTTCATATATTCAGTGGTCAGACAGGAGAATATTTATTTTGTGATATATGTCCTAATGAGTACACCCTATTTCTACCTCACGCTTCTTCTTGTTCCCATTGCTGCCCTCTTGGGTGACTTCGTCTTCCAAGGATTATTCAGGAAATTCACAGAGACGAACCAGATTGCGGCAACAGGACGCAGCTGCTGGAGGTGGGGACTCATCTTACACCATCAGAGGCAAGGAGCTATGCCATGTCTCAACTTCCTCGTGAGGTATCCAAGTACACAGGGTTTGCTTTTGATTCACCTTGCTATGAGTCCTTTTTCGCTTCCCAGTTCGGCGTGTATGCCCCGCATAAGGCATGGGATGTTGCTAAACGAGCTAGCAGGTTTCGAGCACCAAAGATTGGCCACAAAAAATAGTCGATTGTGA 3570 0.4123 MGGPGGVEPQAPDKRTIFCNDRKNKLPSPFTGNSISTTKYNIFTFLPKGLFEQFRRVANLYFLSISILAATPISPISPITNVVPLSLVLLISLIKEAFEDWKRLQNDKVINNRMIDVLQDQTWESVVWKNLQVGDIVRVSVQVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKASEKTWDYLTPEKASEFEGEVQCEQPNNSLYTFTGNLIIQTQTLPVNPNQILLRGCSLKNTGYIVGVVIFTGHETKVMMNSMNVPSKRSTLERKLDKLILVLFTTLFGICFVGAIGSGVFVNNKYFYLRLDVGGEGSGQFNPNNRFLVIVLTLFTLITLYSPLIPISLYVSIEMIKFIQSTQFINKDLCMYHKETNTPALARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGEQVYGTGVTEIERQMAERNGMKVEETKSDTAVQERGFNFDDDRLMQGAWRNEPNPNICKEFFRCLAICHTVLPEGDESPDKVTYQAASPDEAALVIAAKNFGFFFYRRTPTTIYVRESHAEKKGKIQDVPYEILNVLEFNSTRKRQSVICRYADGKLVLYCKGADTVIFERLANGADDIKKLTREYLEQFGAAGLRTLCLAYKELHPHVYESWNEKFIQAKSSLSDRDKKLDEVAELIETDLILIGSTAIEDKLQEGVPACIETLQRAGIKIWVLTGDKIETAINIAYACNLITNEMKKFTISSETDAIREVEERGDPVEITHFIREEVKKELKKSLEEAQSYLRSLNGQKLALVIDGKSLMHALDPSLRATLLNLGLNCHAVVCCRVSPLQKAQVTRLVKKGAHKITLSVGDGANDVSMIQAAHVGVGVSGMEGMQAVMASDFAVAQFRFLVDLLLVHGRWSYLRVCKVITYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTALPVIIVGLFDKDVSASLSRKYPGLYMEGIRNVFFKWSVVATWALFSVYQSLILFYFVILSSSSAKNSVGKTFGQWDVSTMAYTCVIVTVNVRLLMICNSITRWHLIGVGGSILAWFIFAFIYSVVRQENIYFVIYVLMSTPYFYLTLLLVPIAALLGDFVFQGLFRKFTETNQIAATGRSCWRWGLILHHQRQGAMPCLNFLVRYPSTQGLLLIHLAMSPFSLPSSACMPRIRHGMLLNELAGFEHQRLATKNSRL 1189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1593 1189 CDD P-type_ATPase_APLT_Dnf-like 32 990 - -
Prci5g1593 1189 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 449 668 IPR023299 GO:0000166
Prci5g1593 1189 SUPERFAMILY Calcium ATPase, transmembrane domain M 32 1101 IPR023298 -
Prci5g1593 1189 Pfam Phospholipid-translocating ATPase N-terminal 17 81 IPR032631 -
Prci5g1593 1189 Pfam Phospholipid-translocating P-type ATPase C-terminal 858 1102 IPR032630 -
Prci5g1593 1189 Pfam Cation transport ATPase (P-type) 496 590 - -
Prci5g1593 1189 FunFam Phospholipid-transporting ATPase 663 870 - -
Prci5g1593 1189 ProSitePatterns E1-E2 ATPases phosphorylation site. 401 407 IPR018303 -
Prci5g1593 1189 Gene3D - 660 870 IPR023214 -
Prci5g1593 1189 NCBIfam phospholipid-translocating P-type ATPase 30 1104 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Prci5g1593 1189 SFLD Haloacid Dehalogenase 381 881 - -
Prci5g1593 1189 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 14 1107 - -
Prci5g1593 1189 Coils Coil 745 769 - -
Prci5g1593 1189 Gene3D - 95 263 - -
Prci5g1593 1189 FunFam Phospholipid-transporting ATPase 91 264 - -
Prci5g1593 1189 SUPERFAMILY HAD-like 394 886 IPR036412 -
Prci5g1593 1189 FunFam Phospholipid-transporting ATPase IC 396 408 - -
Prci5g1593 1189 Gene3D - 509 653 IPR023299 GO:0000166
Prci5g1593 1189 FunFam Phospholipid-transporting ATPase 507 662 - -
Prci5g1593 1189 SFLD p-type atpase 381 881 IPR044492 -
Prci5g1593 1189 SUPERFAMILY Calcium ATPase, transduction domain A 112 260 IPR008250 -
Prci5g1593 1189 NCBIfam HAD-IC family P-type ATPase 803 909 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g1593 Prci-Chr5 34772711 34786437 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g1593 5 1101 Primary Pumps ATPases AT1G59820 74.887 0.0 1758
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g1593 K14802 - gmx:100815547 1826.99