Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1557 ATGTCTGCTTCTGCCTCTTCTTCTTCTTCCTCCCATGTTGCTGGGGCGAAATATGATGTATTCATTAGCTTTAGAGGTTCAGACATCAGATATGGTTTCCTTAGCCATTTGAAAAGGGAGCTGCGTCGAAAGCAAATAAATGTCTATGTCGATGAGATGCTCCAGAGTAGAGATGAAATATCATTAGCACTTGTTAAAGCAATAGAAGGATCAACCATTTCTTTGGTGGTATTCTCAAAAGACTATGCTTATTCCAACTGGTGCTTGCAGGAGCTTGTCAAAATCATGGAGTGCCATGAAGTCAATAAACAGATTGTAATACCAGTTTTCTACTTTGTAGATCCATCAGATGTTAGGTATCAAAAAGGCATTTATGCAGATGCTTTTGCTAGACATGAATACAAGTTCAAGGATGACATGGAGAAGCTTCAGCTTTGGAGATCTGTCTTGAACCAAACTGCCAACTTATCTGGCTATCATTCATCAAATTTCCGAAACGAATCTGAATTCATTGACAAAATAATCGAAGATGTATTGAAAAAGTTGCAAGACAAAGAATCAATTGAGCCAAAACGTCTTGTTGGATTTGAAGAAAATTTGGCAAGTGTTGAATCATTTATGAAAGTTGACTCACAAGAAGTTCAAATTCTTGGAATTTGGGGTATGGGAGGCATAGAAAATGTGAGAGAAGAATCACGAAAAACTAACGGATTAGCTTCTTTGCTTAAAATAATTCTTTCTGCACTACTAAATGAAGAAAATATTATGAAAGGTGGACCCAGCTTGGTAACTAAGAGAAGGCTACCTAGAAAAAGAGTTCTTTTAGTGCTTGATGATGCGGACACTCCCAACCATTTACAGTATCTGATTGGAGATAATCTACACTTGGGATTAGGTAGCAAAGTTATAATAACAAGTAGAGACAGGCATGTTCTTATTAGTGGAGGGGTTCATGAAATACATGAAGTCAAAGAATTGAACCTGGAAGAATCACTTCAACTTTTCTGTTTGCATGCTTTCAAGCAAGGCCTTCCCAAAACTGGATATGAGGAGTTATCTGCACAGGCAATTGAATATGCTAAAGGCATTCCTTTAGCATTAAAAGTTTTGGGTTCATATCTGAATTCTAGAAAGAGAAGAACGTGGAAAAGTGCTCTGAAAAAATTCCAACAGTATCCCAATGCAGAAATTCAAGATGTGCTGAAGGTGAGTTATAATGGACTAGACAAAGTAGAAAAGAGCATATTTTTGGACATTGCATTCTTCTTCAGAGGAGTACAAAAAGATGATATTGTAAGGGTGCTAGATGCTAGCGACTTCTACACAGATTGTGGAATAGATAATCTGCTAGATAAATCTCTCATAACTATTTCAAGAGACAATGTAATAGAAATGCATGATTTGCTGCTAGAAATGGCTAAAGAAATAGTTCGTGAAGAATCTACAGAACAACCTGAAAGGCGAAGTCGACTAAATGATGCAACAGAAATTTGTGATGTTTTAGAAAATAGCACGGGATCTGATGTGATTGAAGGCATTATCTTACACCTCCATCAAATCAAAGAGTTGCACATCAGCGCTGATTCTTTTAAAAAAATGGGTAATCTAAGATTTTTGAAGATATATTTTTCTTGGGCCAATGAGAGATATAAAGTGAATCTTCCTTTTGGTTTGGAGGCACTTTCTAGTAGGCTGAGGTACTTTTGTTGGGAAGGATATCCTTTGGAATCTCTGCCATTGGGTTTTTCTCCTGCAAAACTTGTTGAGATTCATATGCAATATAGCCAAGTTAAAAAACTATGGGATGGTGTGCAGGATCTGGCGAATTTGAAGATAATAGATATGTCTTCTTCTTACCACTTGATGGAAGTTCCTGATTTTTCCATGGCATGTAATCTTGAAATAGTAAACCTCTCGTCCTGTTTTAGATTGGGTAGTGTCCATCCATCCATCCTATCTCTCCATGGACTTGTTTCTTTGGATCTAAGCAGCTGCCACGAAATAAAGAGTTTTTACAGCAAGAATCATTTGAAATCTCTCAAGTATCTCCACCTGAAATGCTGTGGTCGTCTCAAGGAATTTTTGTTATCATCAAATGAAATGGCGGTTTTGAATTTACAAGCTACTGATATCGAAACATTGAACTTGCCAATTGGGAGGTTCAATAAACTTGAAGAGCTATATCTAGGTGGGGCTCTAAGGAGTTTTCAAATTAAAGAGCTCCGTTGCTTGTCATCTCTTAAGATATTTTCTCTTTTTCATTTTAGAAGAGGAATTGACAAAATGACACTACAAATCCTGTTTGATGCCTTGCGTTCTTTGGAAGAATTATCTTTGACAGATTGTGAGTTGTCTGAAATTCCCGAGAATATTTGTGCCTTATCATCGTTGAAGATTCTTTCACTAGAAGGAAACAGTATGAAGAGTTTGCCTACAAGCATCAAGCACCTTTCTGAGCTTAAAAAAATTTATTTGAGCCGATGCAATAGGCTTAGGTCCTTACCAGAATTCTCACCTTCAATCACTCATTTTTATGTCGATGAATGCAAATCGTTGAAGACCACCGATTTCTTCAGGTTCAGGCGGACAACTTTAAAGCTTGATCACGATAAAGAAGAGCAATGGTTCTTTTCATGTCAGAATTCTGTGAGACTGGGATCGGATAAGCGTGATATTACGGAATTTACCCAATTCTCACTGATGCGAGCAATGTATAACAATTTTTCTGATGCTAGGGTTTGTTACCCCGGAAGCACAATTCCAAAGTGGTTTAGATATACTCAGACGAGGAAGACTTCCATTGCTATTGAACTTGAACCTGCTTGTTCTGACCAATTATTGGGTCTTGTTTGTTGCTGTGTTCTTCATCCATTGGACTCACCGGACGGCTCATCAATATATTGGAAATTCCAGTTCGAAGAAGATGAGATCAATTATGGGCTCGGGAAGGTGTTCCCGTTCCTCAAGAAATTGAATATGGATCATGTTTTTCTGTGGTATGATCCATGGGAACGCATATTAAAGGAAACTCGAAGGAGAGGATATGATCAGGGGACCCCTTCTAAGTTTGTTTCTGAGTTCTGCACTGGAGATGCATTTGATCCCAGGACTTTCAGTTATGACTTGATAAAAGCTTCTGGAATTTGCCCTATATATGCCTCGGAATTACACAGGATGGTTCAACAAATGGAATCAGAGCTGGACAAGGGCACAAGCACAACAACAAAGCGATCTCATAGTTTTGATGATTTACTGCCCAACACTATTGGAGCTGGTGTTGGAGGCTCCTTTTTCGAGAACCAAGACCTGCAAAAATTTGTACGCATGATGAAACAGAAGCACTTGAGAGCAATGCAGTTTCTATAA 3366 0.3815 MSASASSSSSSHVAGAKYDVFISFRGSDIRYGFLSHLKRELRRKQINVYVDEMLQSRDEISLALVKAIEGSTISLVVFSKDYAYSNWCLQELVKIMECHEVNKQIVIPVFYFVDPSDVRYQKGIYADAFARHEYKFKDDMEKLQLWRSVLNQTANLSGYHSSNFRNESEFIDKIIEDVLKKLQDKESIEPKRLVGFEENLASVESFMKVDSQEVQILGIWGMGGIENVREESRKTNGLASLLKIILSALLNEENIMKGGPSLVTKRRLPRKRVLLVLDDADTPNHLQYLIGDNLHLGLGSKVIITSRDRHVLISGGVHEIHEVKELNLEESLQLFCLHAFKQGLPKTGYEELSAQAIEYAKGIPLALKVLGSYLNSRKRRTWKSALKKFQQYPNAEIQDVLKVSYNGLDKVEKSIFLDIAFFFRGVQKDDIVRVLDASDFYTDCGIDNLLDKSLITISRDNVIEMHDLLLEMAKEIVREESTEQPERRSRLNDATEICDVLENSTGSDVIEGIILHLHQIKELHISADSFKKMGNLRFLKIYFSWANERYKVNLPFGLEALSSRLRYFCWEGYPLESLPLGFSPAKLVEIHMQYSQVKKLWDGVQDLANLKIIDMSSSYHLMEVPDFSMACNLEIVNLSSCFRLGSVHPSILSLHGLVSLDLSSCHEIKSFYSKNHLKSLKYLHLKCCGRLKEFLLSSNEMAVLNLQATDIETLNLPIGRFNKLEELYLGGALRSFQIKELRCLSSLKIFSLFHFRRGIDKMTLQILFDALRSLEELSLTDCELSEIPENICALSSLKILSLEGNSMKSLPTSIKHLSELKKIYLSRCNRLRSLPEFSPSITHFYVDECKSLKTTDFFRFRRTTLKLDHDKEEQWFFSCQNSVRLGSDKRDITEFTQFSLMRAMYNNFSDARVCYPGSTIPKWFRYTQTRKTSIAIELEPACSDQLLGLVCCCVLHPLDSPDGSSIYWKFQFEEDEINYGLGKVFPFLKKLNMDHVFLWYDPWERILKETRRRGYDQGTPSKFVSEFCTGDAFDPRTFSYDLIKASGICPIYASELHRMVQQMESELDKGTSTTTKRSHSFDDLLPNTIGAGVGGSFFENQDLQKFVRMMKQKHLRAMQFL 1121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1557 1121 SMART LRR_typ_2 771 793 IPR003591 -
Prci5g1557 1121 SMART LRR_typ_2 794 816 IPR003591 -
Prci5g1557 1121 SMART LRR_typ_2 817 841 IPR003591 -
Prci5g1557 1121 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 159 IPR035897 -
Prci5g1557 1121 FunFam Disease resistance protein (TIR-NBS-LRR class) 14 184 - -
Prci5g1557 1121 Pfam NB-ARC domain 266 409 IPR002182 GO:0043531
Prci5g1557 1121 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 187 419 IPR027417 -
Prci5g1557 1121 Gene3D - 226 316 IPR027417 -
Prci5g1557 1121 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 18 697 IPR044974 GO:0006952
Prci5g1557 1121 Pfam Leucine Rich Repeat 586 605 IPR011713 -
Prci5g1557 1121 PRINTS Disease resistance protein signature 360 374 - -
Prci5g1557 1121 PRINTS Disease resistance protein signature 605 621 - -
Prci5g1557 1121 PRINTS Disease resistance protein signature 216 231 - -
Prci5g1557 1121 Gene3D Ribonuclease Inhibitor 462 698 IPR032675 -
Prci5g1557 1121 Gene3D Ribonuclease Inhibitor 699 860 IPR032675 -
Prci5g1557 1121 SUPERFAMILY L domain-like 465 862 - -
Prci5g1557 1121 Gene3D - 14 188 IPR035897 -
Prci5g1557 1121 Gene3D - 325 409 IPR042197 -
Prci5g1557 1121 ProSiteProfiles TIR domain profile. 16 182 IPR000157 GO:0007165
Prci5g1557 1121 Pfam C-JID domain 915 1055 IPR045344 -
Prci5g1557 1121 SMART till_3 17 156 IPR000157 GO:0007165
Prci5g1557 1121 Pfam TIR domain 17 188 IPR000157 GO:0007165
Prci5g1557 1121 FunFam Disease resistance protein (TIR-NBS-LRR class) 327 409 - -
Prci5g1557 1121 Pfam Leucine rich repeat 772 830 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g1557 Prci-Chr5 34494694 34499338 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g1557 18 823 WRKY Transcription Factor Family AT4G12020 30.769 1.28e-94 331
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g1557 - - pcin:129311144 2199.48