Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1556 ATGTCTGCTTCTGCCTCTTCTTCTTCTTCCTCCCATGTTGCTGGGGCGAAATATGATGTATTCATTAGCTTTAGAGGTTCAGACATCAGATATGGTTTCCTTAGCCATTTGAAAAGGGAGCTGCGTCGAAAGCAAATAAATGTCTATGTCGATGAGATGCTCCAGAGTAGAGATGAAATATCATTAGCACTTGTTAAAGCAATAGAAGGATCAACCATTTCTTTGGTGGTATTCTCAAAAGACTATGCTTATTCCAACTGGTGCTTGCAGGAGCTTGTCAAAATCATGGAGTGCCATGAAGTCAATAAACAGATTGTAATACCAGTTTTCTACTTTGTAGATCCATCAGATGTTAGGTATCAAAAAGGCATTTATGCAGATGCTTTTGCTAGACATGAATACAAGTTCAAGGATGACATGGAGAAGCTTCAGCTTTGGAGATCTGTCTTGAACCAAACTGCCAACTTATCTGGCTATCATTCATCAAATTTCCGAAACGAATCTGAATTCATTGACAAAATAATCGAAGATGTATTGAAAAAGTTGCAAGACAAAGAATCAATTGAGCCAAAACGTCTTGTTGGATTTGAAGAAAATTTGGCAAGTGTTGAATCATTTATGAAAGTTGACTCACAAGAAGTTCAAATTCTTGGAATTTGGGGTATGGGAGGCATAGGTAAAACAACACTTGCTCGTGCTGTATTTGAAAAATTTTCCCCTCAATTTGAATGTTATTTCTTTGCAGAAAATGTGAGAGAAGAATCACGAAAAACTAACGGATTAGCTTCTTTGCTTAAAATAATTCTTTCTGCACTACTAAATGAAGAAAATATTATGAAAGGTGGACCCAGCTTGGTAACTAAGAGAAGGCTACCTAGAAAAAGAGTTCTTTTAGTGCTTGATGATGCGGACACTCCCAACCATTTACAGTATCTGATTGGAGATAATCTACACTTGGGATTAGGTAGCAAAGTTATAATAACAAGTAGAGACAGGCATGTTCTTATTAGTGGAGGGGTTCATGAAATACATGAAGTCAAAGAATTGAACCTGGAAGAATCACTTCAACTTTTCTGTTTGCATGCTTTCAAGCAAGGCCTTCCCAAAACTGGATATGAGGAGTTATCTGCACAGGCAATTGAATATGCTAAAGGCATTCCTTTAGCATTAAAAGTTTTGGGTTCATATCTGAATTCTAGAAAGAGAAGAACGTGGAAAAGTGCTCTGAAAAAATTCCAACAGTATCCCAATGCAGAAATTCAAGATGTGCTGAAGGTGAGTTATAATGGACTAGACAAAGTAGAAAAGAGCATATTTTTGGACATTGCATTCTTCTTCAGAGGAGTACAAAAAGATGATATTGTAAGGGTGCTAGATGCTAGCGACTTCTACACAGATTGTGGAATAGATAATCTGCTAGATAAATCTCTCATAACTATTTCAAGAGACAATGTAATAGAAATGCATGATTTGCTGCTAGAAATGGCTAAAGAAATAGTTCGTGAAGAATCTACAGAACAACCTGAAAGGCGAAGTCGACTAAATGATGCAACAGAAATTTGTGATGTTTTAGAAAATAGCACGGGATCTGATGTGATTGAAGGCATTATCTTACACCTCCATCAAATCAAAGAGTTGCACATCAGCGCTGATTCTTTTAAAAAAATGGGTAATCTAAGATTTTTGAAGATATATTTTTCTTGGGCCAATGAGAGATATAAAGTGAATCTTCCTTTTGGTTTGGAGGCACTTTCTAGTAGGCTGAGGTACTTTTGTTGGGAAGGATATCCTTTGGAATCTCTGCCATTGGGTTTTTCTCCTGCAAAACTTGTTGAGATTCATATGCAATATAGCCAAGTTAAAAAACTATGGGATGGTGTGCAGGATCTGGCGAATTTGAAGATAATAGATATGTCTTCTTCTTACCACTTGATGGAAGTTCCTGATTTTTCCATGGCATGTAATCTTGAAATAGTAAACCTCTCGTCCTGTTTTAGATTGGGTAGTGTCCATCCATCCATCCTATCTCTCCATGGACTTGTTTCTTTGGATCTAAGCAGCTGCCACGAAATAAAGAGTTTTTACAGCAAGAATCATTTGAAATCTCTCAAGTATCTCCACCTGAAATGCTGTGGTCGTCTCAAGGAATTTTTGTTATCATCAAATGAAATGGCGGTTTTGAATTTACAAGCTACTGATATCGAAACATTGAACTTGCCAATTGGGAGGTTCAATAAACTTGAAGAGCTATATCTAGGTGGGGCTCTAAGGAGTTTTCAAATTAAAGAGCTCCGTTGCTTGTCATCTCTTAAGATATTTTCTCTTTTTCATTTTAGAAGAGGAATTGACAAAATGACACTACAAATCCTGTTTGATGCCTTGCGTTCTTTGGAAGAATTATCTTTGACAGATTGTGAGTTGTCTGAAATTCCCGAGAATATTTGTGCCTTATCATCGTTGAAGATTCTTTCACTAGAAGGAAACAGTATGAAGAGTTTGCCTACAAGCATCAAGCACCTTTCTGAGCTTAAAAAAATTTATTTGAGCCGATGCAATAGGCTTAGGTCCTTACCAGAATTCTCACCTTCAATCACTCATTTTTATGTCGATGAATGCAAATCGTTGAAGACCACCGATTTCTTCAGGTTCAGGCGGACAACTTTAAAGCTTGATCACGATAAAGAAGAGCAATGGTTCTTTTCATGTCAGAATTCTGTGAGACTGGGATCGGATAAGCGTGATATTACGGAATTTACCCAATTCTCACTGATGCGAGCAATGTATAACAATTTTTCTGATGCTAGGGTTTGTTACCCCGGAAGCACAATTCCAAAGTGGTTTAGATATACTCAGACGAGGAAGACTTCCATTGCTATTGAACTTGAACCTGCTTGTTCTGACCAATTATTGGGTCTTGTTTGTTGCTGTGTTCTTCATCCATTGGACTCACCGGACGGCTCATCAATATATTGGAAATTCCAGTTCGAAGAAGATGAGATCAATTATGGGCTCGGGAAGGTGTTCCCGTTCCTCAAGAAATTGAATATGGATCATGTTTTTCTGTGGTATGATCCATGGGAACGCATATTAAAGGAAACTCGAAGGAGAGGATATGATCAGGGGACCCCTTCTAAGTTTGTTTCTGAGTTCTGCACTGGAGATGCATTTGATCCCAGGACTTTCAGTTATGACTTGATAAAAGCTTCTGGAATTTGCCCTATATATGCCTCGGAATTACACAGGATGGTTCAACAAATGGAATCAGAGCTGGACAAGGGCACAAGCACAACAACAAAGCGATCTCATAGTTTTGATGATTTACTGCCCAACACTATTGGAGCTGGTGTTGGAGGCTCCTTTTTCGAGAACCAAGACCTGCAAAAATTTGTACGCATGATGAAACAGAAGCACTTGAGAGCAATGCAGTTTCTATAA 3435 0.3805 MSASASSSSSSHVAGAKYDVFISFRGSDIRYGFLSHLKRELRRKQINVYVDEMLQSRDEISLALVKAIEGSTISLVVFSKDYAYSNWCLQELVKIMECHEVNKQIVIPVFYFVDPSDVRYQKGIYADAFARHEYKFKDDMEKLQLWRSVLNQTANLSGYHSSNFRNESEFIDKIIEDVLKKLQDKESIEPKRLVGFEENLASVESFMKVDSQEVQILGIWGMGGIGKTTLARAVFEKFSPQFECYFFAENVREESRKTNGLASLLKIILSALLNEENIMKGGPSLVTKRRLPRKRVLLVLDDADTPNHLQYLIGDNLHLGLGSKVIITSRDRHVLISGGVHEIHEVKELNLEESLQLFCLHAFKQGLPKTGYEELSAQAIEYAKGIPLALKVLGSYLNSRKRRTWKSALKKFQQYPNAEIQDVLKVSYNGLDKVEKSIFLDIAFFFRGVQKDDIVRVLDASDFYTDCGIDNLLDKSLITISRDNVIEMHDLLLEMAKEIVREESTEQPERRSRLNDATEICDVLENSTGSDVIEGIILHLHQIKELHISADSFKKMGNLRFLKIYFSWANERYKVNLPFGLEALSSRLRYFCWEGYPLESLPLGFSPAKLVEIHMQYSQVKKLWDGVQDLANLKIIDMSSSYHLMEVPDFSMACNLEIVNLSSCFRLGSVHPSILSLHGLVSLDLSSCHEIKSFYSKNHLKSLKYLHLKCCGRLKEFLLSSNEMAVLNLQATDIETLNLPIGRFNKLEELYLGGALRSFQIKELRCLSSLKIFSLFHFRRGIDKMTLQILFDALRSLEELSLTDCELSEIPENICALSSLKILSLEGNSMKSLPTSIKHLSELKKIYLSRCNRLRSLPEFSPSITHFYVDECKSLKTTDFFRFRRTTLKLDHDKEEQWFFSCQNSVRLGSDKRDITEFTQFSLMRAMYNNFSDARVCYPGSTIPKWFRYTQTRKTSIAIELEPACSDQLLGLVCCCVLHPLDSPDGSSIYWKFQFEEDEINYGLGKVFPFLKKLNMDHVFLWYDPWERILKETRRRGYDQGTPSKFVSEFCTGDAFDPRTFSYDLIKASGICPIYASELHRMVQQMESELDKGTSTTTKRSHSFDDLLPNTIGAGVGGSFFENQDLQKFVRMMKQKHLRAMQFL 1144
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1556 1144 Gene3D - 348 432 IPR042197 -
Prci5g1556 1144 Pfam Leucine rich repeat 795 853 IPR001611 GO:0005515
Prci5g1556 1144 Pfam Leucine Rich Repeat 609 628 IPR011713 -
Prci5g1556 1144 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 159 IPR035897 -
Prci5g1556 1144 Gene3D - 185 339 IPR027417 -
Prci5g1556 1144 PRINTS Disease resistance protein signature 628 644 - -
Prci5g1556 1144 PRINTS Disease resistance protein signature 290 304 - -
Prci5g1556 1144 PRINTS Disease resistance protein signature 216 231 - -
Prci5g1556 1144 PRINTS Disease resistance protein signature 383 397 - -
Prci5g1556 1144 Pfam NB-ARC domain 211 432 IPR002182 GO:0043531
Prci5g1556 1144 Pfam C-JID domain 938 1078 IPR045344 -
Prci5g1556 1144 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 18 721 IPR044974 GO:0006952
Prci5g1556 1144 Gene3D - 14 184 IPR035897 -
Prci5g1556 1144 Gene3D Ribonuclease Inhibitor 485 721 IPR032675 -
Prci5g1556 1144 Gene3D Ribonuclease Inhibitor 722 883 IPR032675 -
Prci5g1556 1144 SMART LRR_typ_2 794 816 IPR003591 -
Prci5g1556 1144 SMART LRR_typ_2 817 839 IPR003591 -
Prci5g1556 1144 SMART LRR_typ_2 840 864 IPR003591 -
Prci5g1556 1144 FunFam Disease resistance protein (TIR-NBS-LRR class) 14 184 - -
Prci5g1556 1144 ProSiteProfiles TIR domain profile. 16 182 IPR000157 GO:0007165
Prci5g1556 1144 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 187 442 IPR027417 -
Prci5g1556 1144 FunFam Disease resistance protein (TIR-NBS-LRR class) 350 432 - -
Prci5g1556 1144 SMART till_3 17 156 IPR000157 GO:0007165
Prci5g1556 1144 SUPERFAMILY L domain-like 488 885 - -
Prci5g1556 1144 Pfam TIR domain 17 188 IPR000157 GO:0007165
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Prci5g1556 Prci-Chr5 34494693 34499338 Dispersed/Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g1556 18 846 WRKY Transcription Factor Family AT4G12020 31.797 6.54e-104 359