Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1555 ATGCCCAAGAGGCGTCGACCTCTTCCCGATCCTGCTCTGGACCCTACCGCCGATGATGCCGCCAACAAGCACGCAACAAGACCGGCGCCGCCTTGCGCGGTGGTGGTTATGGGTCTCCCTTTGGACTGCTCTGTTCTCGATCTCAAATCCCGATTCGAAATCTACGGTCCCATTTCCCGCATCCGCATCGACCGTGACGGAGTTGGCTACATTACCTATCGGTCCAAGGAATCTGCCGATTCCGCCATAGCTGCTGCCGTTGACCCTTCCTTCGGCATCACCGTCAGCTCGAAAAGGGTGCAGGTATTGTGGGCGACTGATCCTCTGGCCTTGTGGAGGGAAGGAGTAGGTAACAGTAACAAGGAGAAGGGATCGATGTCAAAACTTGTGCGGGCTGAGATACCTTTGAGCAGACATGGAAGAAGTAATAAACTCGCCTCAGCTATAGTGAATCCCAAAAATAGTGAGTCTGGCTCAAGTCGAGACGTGCCTTTCCCGGCCAGAGAAATCGTCGCTTATGATGACATTCTGTAG 534 0.5393 MPKRRRPLPDPALDPTADDAANKHATRPAPPCAVVVMGLPLDCSVLDLKSRFEIYGPISRIRIDRDGVGYITYRSKESADSAIAAAVDPSFGITVSSKRVQVLWATDPLALWREGVGNSNKEKGSMSKLVRAEIPLSRHGRSNKLASAIVNPKNSESGSSRDVPFPAREIVAYDDIL 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1555 177 MobiDBLite consensus disorder prediction 1 26 - -
Prci5g1555 177 CDD RRM_SF 34 85 - -
Prci5g1555 177 SMART rrm1_1 33 103 IPR000504 GO:0003723
Prci5g1555 177 PANTHER GEO13361P1-RELATED 30 136 - -
Prci5g1555 177 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 32 107 IPR000504 GO:0003723
Prci5g1555 177 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 34 85 IPR000504 GO:0003723
Prci5g1555 177 Gene3D - 14 148 IPR012677 -
Prci5g1555 177 SUPERFAMILY RNA-binding domain, RBD 23 110 IPR035979 GO:0003676
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g1555 1 177 Homeobox Transcription Factor Family AT1G27050 52.105 3.69e-54 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g1555 - - pcin:129311146 330.102