Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1549 ATGCCTCAAGGTTTTCAAGAGATGGGGTTGGGTGCTGATAATGGTAAGGTGGAGTCTTGGGATGTCAGCAAATCAAAGGGGAGGAAGAAGAAGAAGAAAGATGATGGCGTCGTGGAAGAGGAAGAAACTGGGTGCTGGTTTAGGCTGAGGTTTATCGGGAGTTGCATTTCTTCGAGATCCAAGGTTGATAGCTCAGTTAGCAGCATCAGCACTCATTACGCTGAAAGTAAATCAACTAACGGTACAAGTAGAGATCAACCAACAGCTCCAGTAGTCTCTTCTACAACCACAAGTAACGCAGAAAGTAATTCATCCACCTCCAAACTTGAAGAGGAGCTTAAGGTTGCTTCCAGGCTGCGAAAGTTCGCATTTAATGATCTTAAGTTGGCAACTAGAAACTTCCGGCCTGAGAGTCTTCTTGGTGAAGGTGGGTTTGGTTGCGTATTCAAGGGATGGATTGAGGAAAATGGAACTGCTCCAGTGAAACCTGGCACAGGGCTGACAGTTGCTGTAAAAACTCTCAACCATGATGGGCTCCAGGGTCATAAAGAATGGCTGGCTGAAGTAAGTTTTCTTGGCGATCTAATTCACCCAAACCTTGTAAAACTCATAGGGTACTGTATTGAAGATGATCAAAGGTTGCTAGTTTATGAATTCATGCCTCGAGGAAGCCTGGAGAACCACCTATTTAGGAGATCCCTGCCGCTTCCATGGTCCATTAGAATGAAAATTGCGCTAGGAGCTGCAAAGGGTTTGGCTTTTCTTCATGAGGAAGCTGAACGACCTGTAATATATAGGGATTTTAAAACTTCCAATATTCTATTGGATGCTGAATACAATGCCAAGCTTTCAGATTTTGGTCTTGCCAAAGATGGTCCAGAGGGTGATAAAACCCATGTATCCACCCGGGTGATGGGAACATATGGTTACGCAGCACCAGAATATGTCATGACAGGTCATCTTACATCAAAAAGTGATGTGTACAGTTTTGGAGTTGTTCTTCTTGAGATGTTGACTGGCAGAAGATCTATGGACAAAAACCGACCCAATGGCGAGCATAACCTTGTTGAATGGGCTCGGCCACATCTTGGAGAGAGAAGAAGGTTCTATAGGTTGATAGATCCTCGGTTAGAAGGTCACTTTTCTATAAAAGGAGCTCAAAAGGCTGCCCAACTGGCCGCTCACTGCCTCAGCAGAGATCCAAAAGCCAGACCCCTGATGAGTGAAGTTGTAGAAGCTTTAAAGCCCCTGCCAAATCTTAAGGACATGGCAAGCTCATCATATTATTTTCAGACGATGCAAGCTGACCGCTTCAGTGCCAGCCCTAATACTCGAAACGGGCGAACGCTGCTTTCCCGGAATGGGCAGCAGCAGAGGAGCCTTTCTATACCACACGGATCTCATGCATCTCCATATCACCACCAGTTTCCCCTACAATCCCCTAAACCTAATGGCAAAGCATAG 1464 0.4556 MPQGFQEMGLGADNGKVESWDVSKSKGRKKKKKDDGVVEEEETGCWFRLRFIGSCISSRSKVDSSVSSISTHYAESKSTNGTSRDQPTAPVVSSTTTSNAESNSSTSKLEEELKVASRLRKFAFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVSFLGDLIHPNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLPNLKDMASSSYYFQTMQADRFSASPNTRNGRTLLSRNGQQQRSLSIPHGSHASPYHHQFPLQSPKPNGKA 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1549 487 FunFam Serine/threonine-protein kinase BIK1 101 219 - -
Prci5g1549 487 MobiDBLite consensus disorder prediction 73 106 - -
Prci5g1549 487 ProSiteProfiles Protein kinase domain profile. 134 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g1549 487 MobiDBLite consensus disorder prediction 1 38 - -
Prci5g1549 487 MobiDBLite consensus disorder prediction 439 487 - -
Prci5g1549 487 ProSitePatterns Serine/Threonine protein kinases active-site signature. 263 275 IPR008271 GO:0004672|GO:0006468
Prci5g1549 487 MobiDBLite consensus disorder prediction 73 109 - -
Prci5g1549 487 SUPERFAMILY Protein kinase-like (PK-like) 120 439 IPR011009 -
Prci5g1549 487 Pfam Protein tyrosine and serine/threonine kinase 138 414 IPR001245 GO:0004672|GO:0006468
Prci5g1549 487 ProSitePatterns Protein kinases ATP-binding region signature. 140 172 IPR017441 GO:0005524
Prci5g1549 487 MobiDBLite consensus disorder prediction 439 465 - -
Prci5g1549 487 PANTHER OS01G0588500 PROTEIN-RELATED 97 417 - -
Prci5g1549 487 CDD STKc_IRAK 140 417 - -
Prci5g1549 487 Gene3D Transferase(Phosphotransferase) domain 1 220 436 - -
Prci5g1549 487 Gene3D Phosphorylase Kinase; domain 1 93 219 - -
Prci5g1549 487 FunFam Probable serine/threonine-protein kinase PBL8 220 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g1549 Prci-Chr5 34361371 34372357 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g1549 103 414 Glycoside Hydrolase AT3G07070 56.467 3.03e-118 352
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Prci5g1549 PK_Tyr_Ser-Thr 2.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g1549 - - qsa:O6P43_025413 855.899