Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1544 ATGGGATTGGGTGCTGATAATGGTAAGGTGGAGTCTTGGGATGTCAGCAAATCAAAGGGGAAGAAGAAGAAGAAAGATGATGGCGTTGTAGAAGAGGAAGAAACTGGGTGTTGGGTTGGCCTGAGGTTCATTGGGAGCTGCATTTCTTCGAGATCCAAGGTTGATAGCTCAGTTAGCAGCATCAGTACTCATTACGCTGAAAGTAAATCAACTAACGGTACAAGTAGAGATCAACCAACAGCTCCAGTAGTCTCTTCTACAACCACAAGTAACGCAGAAAGTAATTCATCCACCTCCAAACTTGAAGAGGAGCTTAAGGTTGCTTCCAGGCTGCGAAAGTTTGCATTTAATGATCTTAAGGTGGCAACAAGAAACTTCCGGCCTGAGAGTCTTCTTGGTGAAGGTGGGTTTGGTTGCGTATTCAAGGGATGGATTGAGGAAAATGGAACTGCTCCAGTGAAACCTGGCACAGGGCTGACAGTTGCTGTAAAAACTCTCAACCATGATGGGCTCCAGGGTCATAAAGAATGGCTGGCTGAAGTAAGTTTTCTTGGTGATCTAATTCATCAAAATCTTGTTAAACTCATAGGCTACTGTATTGAAGATGATCAAAGGTTGCTAGTTTATGAATTCATGCCTCGGGGAAGCCTGGAGAACCACCTATTTAGGAGATCCCTGCCACTTCCATGGTCCATTAGAATGAAAATTGCACTAGGAGCTGCGAAGGGTCTGACTTTTCTTCACGAGGAAGCTGAACGACCAGTAATATATAGGGATTTTAAAACTTCCAATATACTATTGGATGCTGAGTACAATGCCAAGCTTTCAGATTTTGGACTCGCCAAAGATGGTCCAGAGGGTGATAAAACCCATGTATCCACCCGGGTGATGGGAACTTATGGTTATGCAGCGCCAGAATATGTCATGACAGGACATCTTACATCAAAAAGTGATGTGTACAGTTTTGGAGTAGTTCTTCTTGAGATGTTGACTGGCAGAAGATCTATGGACAAAAACCGACCCAATGGCGAGCATAACCTTGTTGAATGGGCTCGGCCACATCTTGGAGAGAGAAGAAGGTTCTATAGGTTGATAGATCCTCGGTTAGAAGGTCACTTTTCTATAAAAGGAGCTCAAAAGGCTGCCCAACTGGCCGCTCACTGCCTCAGCAGAGATCCAAAAGCCAGACCCCTGATGAGTGAAGTTGTAGAAGCTTTAAAGCCCCTGCCAAACCTTAAGGACATGGCAAGCTCATCATATTATTTTCAGACGATGCAAGCTGACCGCTTCAGTGCCAGCCCTAATACTCGAAACGGGCGAACGCTGCTTTCCCGGAATGGGCAGCAGCAGAGGAGCCTTTCTATACCACACGGATCTCATGCATCTCCATATCACCACCAGTTTCCCCTACAATCCCCTAAACCTAATGGCAAAGCATAG 1440 0.4542 MGLGADNGKVESWDVSKSKGKKKKKDDGVVEEEETGCWVGLRFIGSCISSRSKVDSSVSSISTHYAESKSTNGTSRDQPTAPVVSSTTTSNAESNSSTSKLEEELKVASRLRKFAFNDLKVATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVSFLGDLIHQNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLTFLHEEAERPVIYRDFKTSNILLDAEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLPNLKDMASSSYYFQTMQADRFSASPNTRNGRTLLSRNGQQQRSLSIPHGSHASPYHHQFPLQSPKPNGKA 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1544 479 MobiDBLite consensus disorder prediction 431 457 - -
Prci5g1544 479 CDD STKc_IRAK 132 409 - -
Prci5g1544 479 MobiDBLite consensus disorder prediction 1 33 - -
Prci5g1544 479 Gene3D Phosphorylase Kinase; domain 1 85 211 - -
Prci5g1544 479 Gene3D Transferase(Phosphotransferase) domain 1 212 428 - -
Prci5g1544 479 FunFam Probable serine/threonine-protein kinase PBL8 212 427 - -
Prci5g1544 479 FunFam Serine/threonine-protein kinase BIK1 93 211 - -
Prci5g1544 479 ProSitePatterns Serine/Threonine protein kinases active-site signature. 255 267 IPR008271 GO:0004672|GO:0006468
Prci5g1544 479 SUPERFAMILY Protein kinase-like (PK-like) 112 431 IPR011009 -
Prci5g1544 479 ProSiteProfiles Protein kinase domain profile. 126 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g1544 479 MobiDBLite consensus disorder prediction 65 98 - -
Prci5g1544 479 ProSitePatterns Protein kinases ATP-binding region signature. 132 164 IPR017441 GO:0005524
Prci5g1544 479 MobiDBLite consensus disorder prediction 431 479 - -
Prci5g1544 479 MobiDBLite consensus disorder prediction 65 101 - -
Prci5g1544 479 MobiDBLite consensus disorder prediction 12 32 - -
Prci5g1544 479 Pfam Protein tyrosine and serine/threonine kinase 130 406 IPR001245 GO:0004672|GO:0006468
Prci5g1544 479 PANTHER OS01G0588500 PROTEIN-RELATED 90 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g1544 Prci-Chr5 34345067 34351552 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g1544 95 406 Glycoside Hydrolase AT3G07070 56.467 6.55e-119 353
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Prci5g1544 PK_Tyr_Ser-Thr 4.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g1544 - - qsa:O6P43_025413 849.736