Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1529 ATGCTTAAGTGGGAAATGGAGCTAGACTCTGTGAAAAGTGAACTGAGCCCAACAAGTCATAGGTCTTACATGAGGGATGGTGGTGAGAGTAACGCTAGTAAGTGTGGCAAAAGGAGACGAAGAGATTCTTCTTTGGCCATCCTAGAAGCCAATGAACAGCCACAGGGTGAGCGATCAACAACCACGACCACCACCACAGTAAAGAGAAGCTCGAGATTTCGGGGGGTTAGCAGACATAGGTGGACGGGAAGGTTTGAGGCTCATCTATGGGATAAAGGAACATGGAATCCAACTCAGAAGAAGAAAGGGAAGCAAGTTTATCTTGGGGCTTATACTGATGAAGCAGCAGCTGCTAGAGCTTATGATTTAGCTGCCCTAAAGTACTGGGGAACTTCAACTTTCACAAATTTCCCTGTTTCAGAGTATGAGAAAGAGATTGAGATCATGAGAACTGTAACAAAAGAAGAATACCTTGCTTCACTAAGAAGGACAAGTAGTGGTTTTTCTAGAGGCGTGTCAAAGTACAGAGGAGTAGCAAGGCATCATCACAATGGAAGATGGGAAGCAAGAATAGGGAGAGTATTTGGCAACAAATACCTCTACCTTGGGACTTACAGTACACAAGAAGAGGCTGCTCGTGCATACGACATCGCAGCAATTGAGTACAGAGGCATAAATGCAGTGACTAATTTTGACTTGAGTACATACATCAGATGGCTAAGACCTGGAGGACCTTCTACTTGTTTATTAGAGGGAAGGCCAAGCAGAGATCCTCAGAATATGACAGCCTCAAACCTTGTCCAATCAGAAGGAACCACTGAGGTATCCAACTTCATCTTCCATCCATTCCCAGCAGGTGACTCTGACATCAGTACGAAGAAGCAAGGCAGTACACAGTACATGAGCTCTATAAGTGCTTGCAACACTAGGTCATCTTCCCCAACAGCACTAGGGATTCTCCTGAAATCCTCAGTATTTAGAGAGCTGATGCAGAGGAATCTGGACTCTACTAACGAAGAAGCAGAAGAAAGTGAATTGAAAATCCCACAGGATGACAGTGATGGGGTTGGAATGGCTTTTGATCGTGAAATTGCAAGTGCTTCTTTCTTATGCCCCTCCAGTAGCAGCAGATTTTGCATGGAGTCACCAGAAGAAAGCACGTGGCCATTGTATCATAAAACCACACAATCCCTATGGAATGGTGCTTTGAACTGA 1215 0.4469 MLKWEMELDSVKSELSPTSHRSYMRDGGESNASKCGKRRRRDSSLAILEANEQPQGERSTTTTTTTVKRSSRFRGVSRHRWTGRFEAHLWDKGTWNPTQKKKGKQVYLGAYTDEAAAARAYDLAALKYWGTSTFTNFPVSEYEKEIEIMRTVTKEEYLASLRRTSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYSTQEEAARAYDIAAIEYRGINAVTNFDLSTYIRWLRPGGPSTCLLEGRPSRDPQNMTASNLVQSEGTTEVSNFIFHPFPAGDSDISTKKQGSTQYMSSISACNTRSSSPTALGILLKSSVFRELMQRNLDSTNEEAEESELKIPQDDSDGVGMAFDREIASASFLCPSSSSRFCMESPEESTWPLYHKTTQSLWNGALN 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1529 404 MobiDBLite consensus disorder prediction 31 46 - -
Prci5g1529 404 MobiDBLite consensus disorder prediction 48 71 - -
Prci5g1529 404 SUPERFAMILY DNA-binding domain 71 140 IPR016177 GO:0003677
Prci5g1529 404 Gene3D AP2/ERF domain 71 140 IPR036955 GO:0003700|GO:0006355
Prci5g1529 404 Gene3D AP2/ERF domain 173 234 IPR036955 GO:0003700|GO:0006355
Prci5g1529 404 Coils Coil 327 347 - -
Prci5g1529 404 CDD AP2 173 234 IPR001471 GO:0003700|GO:0006355
Prci5g1529 404 PRINTS Ethylene responsive element binding protein signature 73 84 IPR001471 GO:0003700|GO:0006355
Prci5g1529 404 PRINTS Ethylene responsive element binding protein signature 214 234 IPR001471 GO:0003700|GO:0006355
Prci5g1529 404 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 42 292 - -
Prci5g1529 404 MobiDBLite consensus disorder prediction 1 73 - -
Prci5g1529 404 FunFam AP2-like ethylene-responsive transcription factor 71 140 - -
Prci5g1529 404 SMART rav1_2 174 238 IPR001471 GO:0003700|GO:0006355
Prci5g1529 404 SMART rav1_2 72 144 IPR001471 GO:0003700|GO:0006355
Prci5g1529 404 ProSiteProfiles AP2/ERF domain profile. 174 232 IPR001471 GO:0003700|GO:0006355
Prci5g1529 404 ProSiteProfiles AP2/ERF domain profile. 72 138 IPR001471 GO:0003700|GO:0006355
Prci5g1529 404 FunFam AP2-like ethylene-responsive transcription factor 173 234 - -
Prci5g1529 404 SUPERFAMILY DNA-binding domain 173 234 IPR016177 GO:0003677
Prci5g1529 404 MobiDBLite consensus disorder prediction 12 26 - -
Prci5g1529 404 Pfam AP2 domain 173 224 IPR001471 GO:0003700|GO:0006355
Prci5g1529 404 Pfam AP2 domain 71 130 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g1529 Prci-Chr5 34259567 34262273 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g1529 38 236 AP2-EREBP Transcription Factor Family AT5G57390 61.307 1.54e-82 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Prci5g1529 AP2 1.4e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g1529 - - gmx:100799621 551.592