Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1519 ATGAAAATTTTCCGGGTTTTTTTCCTTTATCTGCTCTCTGCAATTTTTCTCGTTTTGCTTACTCACATTTCAACTGCACAGCTGACACCAAGTGAGAGTAGAATTCTCTTTCAAGTTCAGAAAATTCTTGAATATCCTCAGGTTCTTCAAGGATGGAACAAGTGGACCAACTTCTGTTATCTTCCTTCTTCACCTTCTCTCCAGATTGTCTGCTATAACAGTCATGTAATAGAACTAACAATCGTTGGAAACAAAACTTCTAATTCCCTTCAAACTCTTTCTGAAAGATTTTCCATTGATTCTTTCTTCACTGTCTTGACAAAGCTTTCAAATTTGAAGGTACTTTCAATAGTGTCCCTGGGTTTGTGGGGTCCTTTACCTGCCAAGATCAGCAGGTTCTGGTCTCTTCAAGTTCTGAACTTGAGCTCAAATTCCATTCATGGGGAGATCCCACCGTCAATCTCTTCCATGAAAAGTCTCAGGAGTCTGGTCTTGGATGATAATTTGTTCAATGGGACTGTCCCAGATCTTAAAAGATTGACTTCTCTTGAAGAACTCAATCTGGGAAACAATAAACTGGGTCTTGAGTTCCCTTCATTAGGCAACAGTCTTGTAAGTTTAGTGTTGAGAAACAATTCTCTGAGTTCTAAAATTCCTTCGGAGTTTAATCATTTTGACAAGCTTCAAAAACTTGATATTTCTTCCAATGAAGTTTCTGGAAACATCCCATCTTCTCTGTTCTCTCTGCATTCCATTCAGTATCTGAACCTGGCAGAAAACAAACTAAGCGGTTCACTTTCAATGAAAATTAGCTGTGGCTCTTCTCTGACCTTTGTGGATATCTCAAACAATCTCTTGGTGGGAAATTTGCCATCCTGCATCGGATCAACGTCAAAGTCCTCAAATCGCACGGCTTTGTATTCCGGGAATTGCTTGTCCATGAGAGGCTCGAAAGATCAACACCCAACTTCATATTGCAAGAAAGAAGAAGCTTTAGCTGCTAAGCCTCTTGAAGGAAACAAGTGGAACTCAGACATGAGAATAGGGTTAATACTTGGTATAATTGGAGGGTCTGTCGGAATTTCAGCGCTTCTAGCTCTGGTCATTCTTCTCATCTTGAGGAAGACCAAAGCAGAAAGAATTGACAATCATGTAGACAGATCTGTTGCTGATAAATCCTCTGTTCATGCATCCCTGAGACCAAACACTGATACAAGACGCGTTCCGCAGACTATGAGGCTGGTAGCAATTGGACTTCAACCATACAGAATCTTCACATTAGAGGAAATAGAGGAGGCAACAAACAATTTTGACCCATCAAATCTGATAGGAGAAGGATCAGAGGGACAGCAATATAAAGGATGGATCAGAGATGGATCTGTGGTCCTGATTAACTGTGTAAAGCTAATGCACAATAATGTGACCCAAAACCACATTGACGTGTTGTCCAATTTGAGGCATAGGCATTTGGTGAGTGTTATTGGACACTGCCTAATAGCCTCTCAGGACCATCAGCAGACAGCAACCACACTCTTCCTTGTTTATGAACACTTCTCAAATGGGTCATTGAGGGATCATTTAACAGATTGGAGAAAGAAGGAAGTGCTGAAATGGCCACAAAGAATGGCGATCACCATAGGAATTGCAAGAGGGATCCAGTTTTTACACACAGGAATTGTTCCTGGTATATTTGGCAATAAAATAAAGATTGAGAAAATTCTTTTGGATGATAGTCTCGGTGCAAAAGTGAGTGGATATAACATTCCATTGTTATTCAATCATATTGACAGCACTGACAACACCGCGGAAAAGGAAGATATATATCAGTTTGGTGTCATTCTACTGGAAGTTATCACTGGCAAATCAATTTCTTCTGTCAATGAAGTGGAGGAGCTGAAAGATGAGCTAGAGAGAAGTATATCCGAAGCAGCATCAGTACTAAGAGGAGTAACGGATCCCACAATCAGGGGAAGTTATGCGTACGATTCAATGAGAACCACAGTTCAGATTACCATCAGCTGCCTCAGTGAAGTTTCTAGCATGCGCCCTTCAATAGAAGATGTTCTCTGGAATTTGCAGTACGCAATTCAGGTCCAAGAGAACTGGAGCAGCAGCGGAAATCTGGGACTTGGTACCAGATTTTAG 2145 0.4089 MKIFRVFFLYLLSAIFLVLLTHISTAQLTPSESRILFQVQKILEYPQVLQGWNKWTNFCYLPSSPSLQIVCYNSHVIELTIVGNKTSNSLQTLSERFSIDSFFTVLTKLSNLKVLSIVSLGLWGPLPAKISRFWSLQVLNLSSNSIHGEIPPSISSMKSLRSLVLDDNLFNGTVPDLKRLTSLEELNLGNNKLGLEFPSLGNSLVSLVLRNNSLSSKIPSEFNHFDKLQKLDISSNEVSGNIPSSLFSLHSIQYLNLAENKLSGSLSMKISCGSSLTFVDISNNLLVGNLPSCIGSTSKSSNRTALYSGNCLSMRGSKDQHPTSYCKKEEALAAKPLEGNKWNSDMRIGLILGIIGGSVGISALLALVILLILRKTKAERIDNHVDRSVADKSSVHASLRPNTDTRRVPQTMRLVAIGLQPYRIFTLEEIEEATNNFDPSNLIGEGSEGQQYKGWIRDGSVVLINCVKLMHNNVTQNHIDVLSNLRHRHLVSVIGHCLIASQDHQQTATTLFLVYEHFSNGSLRDHLTDWRKKEVLKWPQRMAITIGIARGIQFLHTGIVPGIFGNKIKIEKILLDDSLGAKVSGYNIPLLFNHIDSTDNTAEKEDIYQFGVILLEVITGKSISSVNEVEELKDELERSISEAASVLRGVTDPTIRGSYAYDSMRTTVQITISCLSEVSSMRPSIEDVLWNLQYAIQVQENWSSSGNLGLGTRF 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1519 714 SUPERFAMILY Protein kinase-like (PK-like) 416 692 IPR011009 -
Prci5g1519 714 ProSiteProfiles Protein kinase domain profile. 437 695 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g1519 714 Pfam Leucine rich repeat 203 262 IPR001611 GO:0005515
Prci5g1519 714 SUPERFAMILY L domain-like 47 298 - -
Prci5g1519 714 Coils Coil 626 646 - -
Prci5g1519 714 Gene3D Phosphorylase Kinase; domain 1 400 517 - -
Prci5g1519 714 Gene3D Ribonuclease Inhibitor 30 199 IPR032675 -
Prci5g1519 714 Pfam Leucine Rich Repeat 135 156 IPR001611 GO:0005515
Prci5g1519 714 Gene3D Ribonuclease Inhibitor 200 349 IPR032675 -
Prci5g1519 714 Gene3D Transferase(Phosphotransferase) domain 1 599 707 - -
Prci5g1519 714 Gene3D Transferase(Phosphotransferase) domain 1 518 598 - -
Prci5g1519 714 FunFam Probable LRR receptor-like serine/threonine-protein kinase At2g02780 29 202 - -
Prci5g1519 714 Pfam Protein tyrosine and serine/threonine kinase 442 557 IPR001245 GO:0004672|GO:0006468
Prci5g1519 714 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 204 331 - -
Prci5g1519 714 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 518 707 - -
Prci5g1519 714 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 200 693 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g1519 Prci-Chr5 34210302 34213753 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g1519 45 709 Miscellaneous Gene Families AT3G03770 41.033 4.38e-180 532
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Prci5g1519 PK_Tyr_Ser-Thr 4e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g1519 - - gmx:100803061 889.026