Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1516 ATGGGAAAGACTCCTGGAAAATGGATCAAGGCCTTACTTTCGGGGAAGAAATCAAAGTCTCATTCATCAAAAAGGAAAGATTCCTTTAAACCCTCAAGTACCAAGGATGTGCTGGCAGTGTCCTCTGAAGCACATGTGTCTGATCCAATTGCAGATTCAACAGTGATATCCCAACCCACTTCAGGAGCTACTGCAAGCAAGGGATGCCTTTCCGAAAAGGGCTTAGTCAGTGAATTGTCAAACGACAGGGTTATTCTCTCAGCTAGAGATGAGGAGACCAGTGCACAAGTTGTTGTTGGTTTTGGTTCACAGGATGATCCTGAGAAAATCAAGCTTAACCAAGCTGCTATAAAAGCTCAGACTGCTTTTAGAAGTTATCAGGCTCGACGGGAATTTCAAACACTCAAAGGTGTTGTACAGTTGCAAGCCCTTATCCGTGGTAACTTGGTCAGAAAACAAGCTGTTGCTACTTTATACTGTGTGAAAGGAATTGTTAAATTTCAAGCATTGGTTCGTGGTAACAAGGTTAGGCGTTCTGATATTGGTCTTGCAGTGCATAAAATTTGCAAGGATACTAAATGCTTAATTGCTGTTGAAGCATCAGCATCTACTCAGACAGAGAAGCTGTCAAAAAGTGTCTTTGTTAACAAGCTTCTGGCTTCATTATCCTCTGTCTCTCCTCTATGTATCGACTATAATCCTGAACAACGTAATTTAGCTTCAGACTGGCTTGACCGTTGGACGAATTCTCACTTCTGGGCACCTCTTCTGGGTCTGGAATCAAAAACAAAACTTGACTCAGCATCTAGTGAGAAAATTTGCAACAGTCACAGAAATAATGACGGCCAAGTTAAAAGAATTGGCTGGAAAAGTTCTGGTGTAAAAGTTAATGATGGTTCCGTCTCAGATTCAAGCAAAAATAAACAGCGCCCAAAAAAGGTTTCAACTCACCCATCACATTCAGGCCAAGAAAATGCACAGAAGGAAGTTGAGAAAAGTAATTTAAGAAAACCACTCAAGCAGAATGTTTCTGATAGATCTGAGACTGTTAATGGGAAAGGAAAAGACTTACCAAGAAGAGAATCTGGTCATACTGTCACTGATGCTTCAGAACAAGGACCAAATGATTCTGCAGGAAAAATTAAAGAATCAGCTATGTCAAAATCCAAACAGTCTGATTATGAGCAAGGCCTTGCACAACGAGCAGAAGATGAACATGGTTCTCCCATATCTAACTTGCAGTCTAGATTGAAGAATGGTAAAGATGATGGTATTGACAGTGTGAGCCCTAAGAATTACCAGAGAAGAGCTTCACTGCCTGCTAAGTTTGACAGTCAAGATGACGGTGTGCAAAAAACTCCAAGACTGCCCAGTTACATGGCTCCTACTGAATCTGCAAAAGCTAGGGTAAGAGGACAAGGCTCCCCTAGGCTTGTTAGTGAATTGGTAGATAAAAATGGTTCAACCAGGCGGCATTCACTTTCATCTTCGGTCAATGGCAAGTTAGGTTCAATTTCTCCACTAGCAGAAAGTCTGGGAGCTTTGAGCAGCAAGGGAGTAAATAGAACTGATAGATCTCTGTCATCTTCAAGGGATGGGAGTGAGAAGTTGATCCAACCTAAGTGGAGAAGGTGA 1635 0.4177 MGKTPGKWIKALLSGKKSKSHSSKRKDSFKPSSTKDVLAVSSEAHVSDPIADSTVISQPTSGATASKGCLSEKGLVSELSNDRVILSARDEETSAQVVVGFGSQDDPEKIKLNQAAIKAQTAFRSYQARREFQTLKGVVQLQALIRGNLVRKQAVATLYCVKGIVKFQALVRGNKVRRSDIGLAVHKICKDTKCLIAVEASASTQTEKLSKSVFVNKLLASLSSVSPLCIDYNPEQRNLASDWLDRWTNSHFWAPLLGLESKTKLDSASSEKICNSHRNNDGQVKRIGWKSSGVKVNDGSVSDSSKNKQRPKKVSTHPSHSGQENAQKEVEKSNLRKPLKQNVSDRSETVNGKGKDLPRRESGHTVTDASEQGPNDSAGKIKESAMSKSKQSDYEQGLAQRAEDEHGSPISNLQSRLKNGKDDGIDSVSPKNYQRRASLPAKFDSQDDGVQKTPRLPSYMAPTESAKARVRGQGSPRLVSELVDKNGSTRRHSLSSSVNGKLGSISPLAESLGALSSKGVNRTDRSLSSSRDGSEKLIQPKWRR 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1516 544 MobiDBLite consensus disorder prediction 528 544 - -
Prci5g1516 544 Gene3D - 109 158 - -
Prci5g1516 544 MobiDBLite consensus disorder prediction 489 504 - -
Prci5g1516 544 SMART iq_5 134 155 IPR000048 GO:0005515
Prci5g1516 544 SMART iq_5 111 133 IPR000048 GO:0005515
Prci5g1516 544 SMART iq_5 159 181 IPR000048 GO:0005515
Prci5g1516 544 MobiDBLite consensus disorder prediction 275 544 - -
Prci5g1516 544 ProSiteProfiles IQ motif profile. 136 163 IPR000048 GO:0005515
Prci5g1516 544 Pfam IQ calmodulin-binding motif 162 178 IPR000048 GO:0005515
Prci5g1516 544 Pfam IQ calmodulin-binding motif 114 133 IPR000048 GO:0005515
Prci5g1516 544 Pfam IQ calmodulin-binding motif 136 153 IPR000048 GO:0005515
Prci5g1516 544 MobiDBLite consensus disorder prediction 13 35 - -
Prci5g1516 544 MobiDBLite consensus disorder prediction 382 396 - -
Prci5g1516 544 Pfam Protein of unknown function (DUF4005) 445 512 IPR025064 -
Prci5g1516 544 MobiDBLite consensus disorder prediction 324 366 - -
Prci5g1516 544 ProSiteProfiles IQ motif profile. 112 140 IPR000048 GO:0005515
Prci5g1516 544 PANTHER IQ-DOMAIN 5-RELATED 1 496 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g1516 Prci-Chr5 34187692 34192415 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g1516 1 544 IQD Protein Family AT2G02790 33.657 1.83e-74 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g1516 - - pcin:129310447 1041.57