Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1510 ATGGGAGTTTGTTTGAGCAGAAATTCTCTGGATCCCAACCAGCCCCTCAATAATATAGTTCATCATCCTATGGGCGCTGGAAGACATGCCCACGTGGGAAGACCATGGATTCTCAATGAACAGAGGAATCTTTTTGTTGTTTCAAAGAATCAAAGAGGAAGGAGGAACAGGGATGAAAAGAAGAAATATATAGCTGATAGTAGGGATTTGCATGCTCTGAAAGCAGACAAGGGTATAAGGTTCCAAACTCGTAAGCTAAAAAAGTTTTCCTATGTAGTCTTGGAAGTTGCCACGCGCAGGTTCAGCACTAAGAACTTGATCGGCAGGGGAGGTTTTGCTGATGTTTATAAGGGATATCTCTCGCACCACACCATGAATGCTGCAAAACCAAATGAAGGATTCACCATAGCTGTCAAGAGAATAAGAAGGCATGGAGCACGAGGACACGAAGAATGGCTGAATGAAGTGATACATTTGAGCAAAATTAGCCATCCGAACGTGGTGAATCTCATAGGGTATTGCCGTGAGGGTCAGCATAGAATGCTTGTGATTGAGTACATGGTTGAAGGAAGCTTGGAGGACCATCTCACGAAAGAAGTCAGACGAACGCTAAACTGGAATAGAAGAATTAATATAGCACTTGGAGCAGCAAGGGGTTTAGACTATCTTCACACCTATGAAACACCAGTAATTCACCGAGATATTAAATCTTCCAATATCCTGCTAGATGCTAATGATATTGCAGAACTTCAATACAAAGCTCTGACTTCGGACTGGCTAGAGATGGACCTGAAGATGACCGGTCCCATGTATCCACAAGAATCCTTGGCACTAGAGGCTATTTTGCCCCCGAGTATGTGGCCACAGGTAACTGACACATCCTCGATCATGGAAAACAAGGGTCATGCAGAAACTTCATCAGATACTCAGGCTGATGTATATAGCTTTGGAGTGGTTCTGCTAGAGATATTATCTGGCTCTGGTGCAGTTAGGAAACATTCAGATGGGGTGGTGGGTAATCTTGCCCGGTGGGCTGAACCATTTTTAAGTAACAAATTGGAACTTCACCGCGTTATAGACAAGAGACTAGGACAAAATTTTCCGATGGAAGGTGCCTATGAGTTGGCTCAACTAATACTAAACTGCCTCTGCTTAAACCCCAAGCATCGCCCAACAATGGCTGAAGTTGTGGGTGCCTTGGAACAGATAGAGCTAAACCTTGGATTGCATCACAAGAGATTGTATAGTAGAAGAACCAGCACTCATTCTTATTCTCACTGTTAA 1284 0.4361 MGVCLSRNSLDPNQPLNNIVHHPMGAGRHAHVGRPWILNEQRNLFVVSKNQRGRRNRDEKKKYIADSRDLHALKADKGIRFQTRKLKKFSYVVLEVATRRFSTKNLIGRGGFADVYKGYLSHHTMNAAKPNEGFTIAVKRIRRHGARGHEEWLNEVIHLSKISHPNVVNLIGYCREGQHRMLVIEYMVEGSLEDHLTKEVRRTLNWNRRINIALGAARGLDYLHTYETPVIHRDIKSSNILLDANDIAELQYKALTSDWLEMDLKMTGPMYPQESLALEAILPPSMWPQVTDTSSIMENKGHAETSSDTQADVYSFGVVLLEILSGSGAVRKHSDGVVGNLARWAEPFLSNKLELHRVIDKRLGQNFPMEGAYELAQLILNCLCLNPKHRPTMAEVVGALEQIELNLGLHHKRLYSRRTSTHSYSHC 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1510 427 ProSiteProfiles Protein kinase domain profile. 101 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g1510 427 Gene3D Phosphorylase Kinase; domain 1 71 186 - -
Prci5g1510 427 ProSitePatterns Protein kinases ATP-binding region signature. 107 139 IPR017441 GO:0005524
Prci5g1510 427 ProSitePatterns Serine/Threonine protein kinases active-site signature. 230 242 IPR008271 GO:0004672|GO:0006468
Prci5g1510 427 PANTHER OS01G0588500 PROTEIN-RELATED 63 404 - -
Prci5g1510 427 Gene3D Transferase(Phosphotransferase) domain 1 187 415 - -
Prci5g1510 427 SMART serkin_6 101 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g1510 427 Pfam Protein tyrosine and serine/threonine kinase 103 399 IPR001245 GO:0004672|GO:0006468
Prci5g1510 427 SUPERFAMILY Protein kinase-like (PK-like) 82 403 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g1510 Prci-Chr5 34157215 34159235 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g1510 87 400 Glycoside Hydrolase AT3G07070 36.223 1.01e-52 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Prci5g1510 PK_Tyr_Ser-Thr 2.6e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g1510 - - pcin:129310859 870.537