Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1508 ATGAGGAAGCTGAAGCAGCAGCAGCAGCAGCAGCAGCTGGGTGAGCAAGAAGAATCTCAGAAGAAGGAGCGTCATATTGTGACGTGGACTCAAGAGGAAGATGATATATTGAGGAAGCAGATAAGCATCCATGGAACTGAAAATTGGGCAATTATTGCATCTAACTTCAACGACAAAACGACAAGACAGTGCAGAAGAAGATGGTACACTTACTTGAACTCTGATTTCAAGAAAGGAGGATGGTCACCGGAGGAAGACTTGCTCTTATGTGAGGCTCAGAAAATATTTGGTAACAGATGGACAGAAATAGCAAAGGTGGTTTCAGGCAGAACTGATAATGCTGTGAAAAATCGTTTCTCCACTCTTTGCAAGAAGAGAGCAAAATTTGAAGCCTTGGCAAAAGAGAATAGCACTTCGTTCACTAATTCAAATAACAAAAGGACTATTTTCCAACAGGGTGATAACAGAGAGTCAACATCAGAGGCTGCAGCACCTACTAAGAAGATGAGGAGAGCCCATATCCCTGACGCTGCAGAAAAGATCAACTTCGGAGATAGATCCCATAAGCAATATGAAGCAACAATAAAACAGCAGTCAAGAGCACTGTTTTCGATTTTGGGTCAGAATTTGCCAGGTCAGCATGAATCTTCCAGTGCCAAGATCAGCAGTGATGCCCATAATTGCAAGACTCAAGGAACATTTCTTAAAGAGGATGATCCAAAGATAAGCGTGATAATGCAACAGGCGGAGTTATTAAGTTCACTAGCTCTAAAAGTTAATACAGATGATGTGGGCCAGAGTCTTGAAGACGCATGGAAGGTTCTTCAAGAGTTTCTGAACCAAACCAAAGAATCAGATATTCTTAAATATAAGATTTCAGATTTACAGCTCGTAGATCTTAAAGACATTATGGAGGAATTTAAGAGTAGTAATGAGGGGAGCCAGCAATGTTGGAGGCAACCAGAACTATATGAAGACTCTCCAAGCAGTTCTGAATACAGTACAGGATCAACTCTTCTGCCCCATTCAGCAAGTGATAATCTGGAACACTCTCTGCTTCAGGATATTGGAACTGACCTAAAGCCTATCCAACTTGGAGATCAAAAAAGAGTTAGTGAACGTGGGAAAGAAGATCTCTCTTCTGCAACTATGGGTCAAGTGGCAGATATCTTCCCATCTTGTGAGGAACAAATAAGCAATGATGGCATTGCTTCTACCTCATCAAGCACAGAGTTCAATTCCCCAATTCAAGTTACCCCTATGTTCAGATCTTTGGCTGCAGGAATTCCCAGCCCCCAGTTTTCAGAAAGTGAAAGGAACTTCCTAATGAAAACGCTTGGAATGGAGTCCCCATCCATGAACGCCGGTGCCAACCCCTCACAGCCACCACCTTGCAAAAGAGCCCTACTACACAGTCTATAA 1422 0.4255 MRKLKQQQQQQQLGEQEESQKKERHIVTWTQEEDDILRKQISIHGTENWAIIASNFNDKTTRQCRRRWYTYLNSDFKKGGWSPEEDLLLCEAQKIFGNRWTEIAKVVSGRTDNAVKNRFSTLCKKRAKFEALAKENSTSFTNSNNKRTIFQQGDNRESTSEAAAPTKKMRRAHIPDAAEKINFGDRSHKQYEATIKQQSRALFSILGQNLPGQHESSSAKISSDAHNCKTQGTFLKEDDPKISVIMQQAELLSSLALKVNTDDVGQSLEDAWKVLQEFLNQTKESDILKYKISDLQLVDLKDIMEEFKSSNEGSQQCWRQPELYEDSPSSSEYSTGSTLLPHSASDNLEHSLLQDIGTDLKPIQLGDQKRVSERGKEDLSSATMGQVADIFPSCEEQISNDGIASTSSSTEFNSPIQVTPMFRSLAAGIPSPQFSESERNFLMKTLGMESPSMNAGANPSQPPPCKRALLHSL 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1508 473 MobiDBLite consensus disorder prediction 1 15 - -
Prci5g1508 473 CDD SANT 81 122 IPR001005 -
Prci5g1508 473 MobiDBLite consensus disorder prediction 449 473 - -
Prci5g1508 473 ProSiteProfiles Myb-like domain profile. 29 72 IPR001005 -
Prci5g1508 473 MobiDBLite consensus disorder prediction 1 24 - -
Prci5g1508 473 Pfam Myb-like DNA-binding domain 29 88 - -
Prci5g1508 473 SUPERFAMILY Homeodomain-like 25 119 IPR009057 -
Prci5g1508 473 Gene3D - 16 77 - -
Prci5g1508 473 MobiDBLite consensus disorder prediction 311 341 - -
Prci5g1508 473 FunFam Transcription factor MYB124 21 77 - -
Prci5g1508 473 CDD SANT 28 72 IPR001005 -
Prci5g1508 473 SMART sant 25 74 IPR001005 -
Prci5g1508 473 SMART sant 77 125 IPR001005 -
Prci5g1508 473 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 21 72 IPR017930 -
Prci5g1508 473 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 73 127 IPR017930 -
Prci5g1508 473 Gene3D - 80 155 - -
Prci5g1508 473 ProSiteProfiles Myb-like domain profile. 73 123 IPR001005 -
Prci5g1508 473 PANTHER MYB PROTEIN-RELATED 28 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g1508 Prci-Chr5 34134439 34140674 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g1508 67 473 MYB Transcription Factor Family AT1G14350 51.463 4.31e-135 393
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Prci5g1508 Myb_DNA-bind_6 2.5e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g1508 K09422 - gmx:100807667 644.039