Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1493 ATGATCATGGAGGAGTCAGATCATCCTAATGGGATCCGCAGACCTAATTTTCCTCTGCAGCTGTTGGAGAAGAAAAATGGTGAACAGCGACACGAGGAGGAGGAGGATTCGGCTGTGGCAAAAGCTTGCTTCGCCGACCCGACCCGACCCGAAAATAACCTCCAGCTCGCCGATAATTCCAAGAAGGCGCCTCCGAAGCGCACATCCACCAAGGACAGGCACACGAAGGTGGAAGGTCGGGGCCGTCGGATCCGCATGCCGGCGGCTTGCGCTGCCAGAGTGTTTCAGCTGACCAGGGAGCTCGGCCATAAGTCCGACGGCGAGACCATCGAGTGGCTGCTCCAACAGGCAGAACCCGCCGTGATCGCCGCTACGGGGACTGGGACCATTCCTGCCAATTTTACTTCCCTCAACATCTCGCTCCGCAGCTCCGGCTCGACGGTGTCAGCGCCGTCACAGTACTTCAGGGGTAATAATTATAGTAATTACTTCAGTCCCAGCTTGTTTTCTTCATCGTTGCAGTTGAGAAACGCGGTCATGGATGATCCCAGAAGGATCTTGTTTCCCGGGGGCGCCGTCGGGTTTTCTTCTTCGTCTTCTTCTTCCGAGAATTCTTCAATGAATAATTTCAGTTCTGCGAGTAATGTGAATGCCATTCTACAACTATCAAAGCAAGAGCTTAGGGAAGAAACTGGCGGCGGCGGCGGCGGCCTTGAATCCACGCCAACAGAAACCGAAGGAAGCTTGCCAAAAAAGAGGAGGTCACCGGAACAGGAACTATCACAGAGTCAGATAGGCAGTTATTTGTTACAGTCCAGCACCGGTTCAATTCCGGCGAGTCATTCATCAGTTCCGGCGACGTTTTGGATGGTAAGTAGCCCCGCCGGAAACAACCAATCCATGGGCAGCAGTGGCAGTAACAGCGGAAGCAGTAGTGGTGACCCTGTATGGGCAATTCCCTCCGGCGGTAATTACAGTAATATGTATAGAGGAGCCATGCCCGGCAGCGGAATTCATTTTATGAATTTTGCTTCTCCAATGGCTCTGATGGGTGGACAGCAATTAGGCGGTACAGTGATGAATGAAAGCAACTTAGGCATGCTTGCAGCCCTAAATGCATACAGACAGATTCCGTCCAGTGGCGTTCCGGAATCTCCCGCGATCACCGGACACGGAGGAGGTGAGCATTCCTGA 1194 0.5318 MIMEESDHPNGIRRPNFPLQLLEKKNGEQRHEEEEDSAVAKACFADPTRPENNLQLADNSKKAPPKRTSTKDRHTKVEGRGRRIRMPAACAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTSLNISLRSSGSTVSAPSQYFRGNNYSNYFSPSLFSSSLQLRNAVMDDPRRILFPGGAVGFSSSSSSSENSSMNNFSSASNVNAILQLSKQELREETGGGGGGLESTPTETEGSLPKKRRSPEQELSQSQIGSYLLQSSTGSIPASHSSVPATFWMVSSPAGNNQSMGSSGSNSGSSSGDPVWAIPSGGNYSNMYRGAMPGSGIHFMNFASPMALMGGQQLGGTVMNESNLGMLAALNAYRQIPSSGVPESPAITGHGGGEHS 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1493 397 MobiDBLite consensus disorder prediction 1 79 - -
Prci5g1493 397 Pfam TCP family transcription factor 68 210 IPR017887 -
Prci5g1493 397 ProSiteProfiles TCP domain profile. 70 124 IPR017887 -
Prci5g1493 397 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 38 387 IPR005333 GO:0003700
Prci5g1493 397 MobiDBLite consensus disorder prediction 296 315 - -
Prci5g1493 397 MobiDBLite consensus disorder prediction 64 79 - -
Prci5g1493 397 MobiDBLite consensus disorder prediction 227 264 - -
Prci5g1493 397 MobiDBLite consensus disorder prediction 24 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g1493 Prci-Chr5 34007098 34008690 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g1493 60 362 TCP Transcription Factor Family AT3G47620 40.974 5.63e-57 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Prci5g1493 TCP 3e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g1493 - - qsa:O6P43_025447 404.831