LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci5g1493	ATGATCATGGAGGAGTCAGATCATCCTAATGGGATCCGCAGACCTAATTTTCCTCTGCAGCTGTTGGAGAAGAAAAATGGTGAACAGCGACACGAGGAGGAGGAGGATTCGGCTGTGGCAAAAGCTTGCTTCGCCGACCCGACCCGACCCGAAAATAACCTCCAGCTCGCCGATAATTCCAAGAAGGCGCCTCCGAAGCGCACATCCACCAAGGACAGGCACACGAAGGTGGAAGGTCGGGGCCGTCGGATCCGCATGCCGGCGGCTTGCGCTGCCAGAGTGTTTCAGCTGACCAGGGAGCTCGGCCATAAGTCCGACGGCGAGACCATCGAGTGGCTGCTCCAACAGGCAGAACCCGCCGTGATCGCCGCTACGGGGACTGGGACCATTCCTGCCAATTTTACTTCCCTCAACATCTCGCTCCGCAGCTCCGGCTCGACGGTGTCAGCGCCGTCACAGTACTTCAGGGGTAATAATTATAGTAATTACTTCAGTCCCAGCTTGTTTTCTTCATCGTTGCAGTTGAGAAACGCGGTCATGGATGATCCCAGAAGGATCTTGTTTCCCGGGGGCGCCGTCGGGTTTTCTTCTTCGTCTTCTTCTTCCGAGAATTCTTCAATGAATAATTTCAGTTCTGCGAGTAATGTGAATGCCATTCTACAACTATCAAAGCAAGAGCTTAGGGAAGAAACTGGCGGCGGCGGCGGCGGCCTTGAATCCACGCCAACAGAAACCGAAGGAAGCTTGCCAAAAAAGAGGAGGTCACCGGAACAGGAACTATCACAGAGTCAGATAGGCAGTTATTTGTTACAGTCCAGCACCGGTTCAATTCCGGCGAGTCATTCATCAGTTCCGGCGACGTTTTGGATGGTAAGTAGCCCCGCCGGAAACAACCAATCCATGGGCAGCAGTGGCAGTAACAGCGGAAGCAGTAGTGGTGACCCTGTATGGGCAATTCCCTCCGGCGGTAATTACAGTAATATGTATAGAGGAGCCATGCCCGGCAGCGGAATTCATTTTATGAATTTTGCTTCTCCAATGGCTCTGATGGGTGGACAGCAATTAGGCGGTACAGTGATGAATGAAAGCAACTTAGGCATGCTTGCAGCCCTAAATGCATACAGACAGATTCCGTCCAGTGGCGTTCCGGAATCTCCCGCGATCACCGGACACGGAGGAGGTGAGCATTCCTGA	1194	0.5318	MIMEESDHPNGIRRPNFPLQLLEKKNGEQRHEEEEDSAVAKACFADPTRPENNLQLADNSKKAPPKRTSTKDRHTKVEGRGRRIRMPAACAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTSLNISLRSSGSTVSAPSQYFRGNNYSNYFSPSLFSSSLQLRNAVMDDPRRILFPGGAVGFSSSSSSSENSSMNNFSSASNVNAILQLSKQELREETGGGGGGLESTPTETEGSLPKKRRSPEQELSQSQIGSYLLQSSTGSIPASHSSVPATFWMVSSPAGNNQSMGSSGSNSGSSSGDPVWAIPSGGNYSNMYRGAMPGSGIHFMNFASPMALMGGQQLGGTVMNESNLGMLAALNAYRQIPSSGVPESPAITGHGGGEHS	397

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Prci5g1493	397	MobiDBLite	consensus disorder prediction	1	79	-	-
Prci5g1493	397	Pfam	TCP family transcription factor	68	210	IPR017887	-
Prci5g1493	397	ProSiteProfiles	TCP domain profile.	70	124	IPR017887	-
Prci5g1493	397	PANTHER	TRANSCRIPTION FACTOR TCP4-RELATED	38	387	IPR005333	GO:0003700
Prci5g1493	397	MobiDBLite	consensus disorder prediction	296	315	-	-
Prci5g1493	397	MobiDBLite	consensus disorder prediction	64	79	-	-
Prci5g1493	397	MobiDBLite	consensus disorder prediction	227	264	-	-
Prci5g1493	397	MobiDBLite	consensus disorder prediction	24	40	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci5g1493	Prci-Chr5	34007098	34008690	Dispersed/Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci5g1493	60	362	TCP Transcription Factor Family	AT3G47620	40.974	5.63e-57	192

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	TCP	Prci5g1493		TCP	3e-35	No_clan

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci5g1493	-		-	qsa:O6P43_025447	404.831

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