Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1446 ATGCGACGGTTGAATGCCCGTACTCGGGTCAATTCCAAATCTAGACGCATGGATCCGAATCCGATTAAGCTTCATCTTCGCCCCAGCGCTCGCTCGGGTCTCTTTTCGCGCAATTCTAAGAGTGTTTTCAGGTCCAACTGTTTTGTTTTCTCTTCGATTCTGATCGCCCTTGCTTTTTTCATCGGTTACGCAATCTTCTCTGGCAACAGTTCGCATTATTCCGTGGTAACAAAATTTGCGATCGTTATTGATGGAGGGAGCACCGGGACCAGGATTCACGTGTTAAAGTACAGGTTGGAAGGTGGGAATCCAGTGTTTGATTTTGGGAAGGATGGTTTGTCTTCGATGAGAGTAAACCCAGGTCTTTCGTCATTTGTGGGGGAGCCAGATGGGGCTGGCCACTCTCTTTTGGAGCTTCTGGATTTTGGAAAGAGTAAAATTCCAAAGGAATCTTGGAGGGATACGGAAATTCGACTGATGGCGACGGCTGGGTTGAGGATGCTGGAAGTAAATGTGCAGCAGCGGATTCTGGAATCATGTAGGAGATTGCTCTGCTCATCTGGGTTTAAATTTAGGGACGAGTGGGCTTCTGTCATTACAGGTTCCGATGAAGGAGTATATGCTTGGGTTGTTGCAAACCATGCACTTGGCACACTTGGAGGTGATCCTTTGCATACAACAGGGATTATTGAACTTGGTGGGGCTTCTGCTCAGGTAACATTTGTATCAACTGAGTCATTTCCATCTGGGTTCTTACGTGCTGTTAGACTTGGAAATACCACTTACAACCTTTACAGCAACAGCTTTCTTCATTTTGGCCTGAATGCTGCTCATGACTCAGTGAGGGAAGCACTTGTATCTGGAGAGTTTGACATGGCTACTCAATCTCTTCAGAAGGGATTGCTAATTGATCCTTGCACTCCCAAAGGCTATTCTCACAATGATAAGTCATGGGATCGCTCTCCTGGTTCAATGAAGGAAGAGAACCAATATCTTTCTACTCTTCAAAGTAGGGGAAACTTTTCAGAGTGCAGATCTGCTGCATTGATGCTATTACAGAAAGGGAAAGAAAAATGTTCCTATCAGCATTGTGACATCGGATCAACTTTTGTACCTAGGCTTCAAGGGAAGTTTCTTGCCACAGAAAATTTCTTCTATACATCCAAGTTTTTTGAATTGGGACCAAGGGCGTTTTTGTCAGAGTTGATGGCAGCTGGTCAAAAATTTTGTGAAGAGGATTGGTCAAAGCTGAAGAAAAAATATCAGTCCCTTCATGAGGAAGATTTGCTTCGGTATTGCTTCTCTTCAGCGTACACTGTTGCTTTGCTTCATGACAGCCTTGGAATTGCTTTGGATGATGAAAGGATTAAGGTTGCTAATCAGGTGGGAAGTATTCCACTTGATTGGGCTTTGGGAGCTTTTATCTTGCAAAGCACAGCTGATTCAGATGCACAGAACCATAATTGGATTGCCAACGTCAGCAATGGATCACCGACACTCCTCTTACTTATTGCCATTTTTGTAATATTGTTTACAGCATGGTCTATATCTAAGTGGAGAAAACCTCAGCTAAAGACAATCTATGATCTTGAAAAGGGGCGTTATATAGTTACACGAGTTGGGAGATCTTGA 1632 0.4381 MRRLNARTRVNSKSRRMDPNPIKLHLRPSARSGLFSRNSKSVFRSNCFVFSSILIALAFFIGYAIFSGNSSHYSVVTKFAIVIDGGSTGTRIHVLKYRLEGGNPVFDFGKDGLSSMRVNPGLSSFVGEPDGAGHSLLELLDFGKSKIPKESWRDTEIRLMATAGLRMLEVNVQQRILESCRRLLCSSGFKFRDEWASVITGSDEGVYAWVVANHALGTLGGDPLHTTGIIELGGASAQVTFVSTESFPSGFLRAVRLGNTTYNLYSNSFLHFGLNAAHDSVREALVSGEFDMATQSLQKGLLIDPCTPKGYSHNDKSWDRSPGSMKEENQYLSTLQSRGNFSECRSAALMLLQKGKEKCSYQHCDIGSTFVPRLQGKFLATENFFYTSKFFELGPRAFLSELMAAGQKFCEEDWSKLKKKYQSLHEEDLLRYCFSSAYTVALLHDSLGIALDDERIKVANQVGSIPLDWALGAFILQSTADSDAQNHNWIANVSNGSPTLLLLIAIFVILFTAWSISKWRKPQLKTIYDLEKGRYIVTRVGRS 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1446 543 Pfam GDA1/CD39 (nucleoside phosphatase) family 77 479 IPR000407 GO:0016787
Prci5g1446 543 Gene3D Exopolyphosphatase. Domain 2 200 463 - -
Prci5g1446 543 Gene3D - 78 475 - -
Prci5g1446 543 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 51 485 IPR000407 GO:0016787
Prci5g1446 543 CDD NBD_sugar-kinase_HSP70_actin 81 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g1446 Prci-Chr5 33711778 33717441 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g1446 28 478 Nodulin-like Gene Family AT4G19180 27.766 5.75e-41 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g1446 K01510 - qsa:O6P43_033016 793.112