Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1435 ATGAAGGCAGCTTGGCGGAACAGCCTCGTTTATTCTTCTCAAGAACACCCCAATGCTCTCGCATCTTCTGATCTCTCGTCTTCTTCGATGGGAATGGTGTATGCAGACATGGGCTCTCTTTCTCTTTCCTCTTCTTCTTCTGAAATGGGAAATAACAATGTTGGGGGCACCAGCTGGGGTGATTTTGCCTTTACGAGGGATCACCTTCCCAACACTGGTACCACCGATACTAATAATGATGATGCTTTGGAGGGTAAAGCTTCTGATTCTAGTACTGATCCTGAGAATCTGATGGATCATAACCAAGAAAACCCTAATGAGAATTCTGGTGTCAGTACGGGAAAAGAAGCAGATTCCGGGCAGTCAAAGCTTTGTGCACGAGGCCATTGGAGGCCTGCAGAAGATGCCAAGCTGAAGGAGCTCGTGGCTCTCTATGGCCCTCAGAACTGGAACCTCATAGCAGAAAAATTGGAAGGAAGATCAGGCAAGAGCTGCAGGCTGAGGTGGTTCAACCAGCTGGATCCAAGGATAAACAGGAGAGCATTTACTGAGGAAGAAGAAGATAGGCTAATGCAGGCACATAGAATATATGGGAACAAATGGGCTATGATTGCCAGGCTATTCCCGGGAAGAACTGATAATGCAGTGAAGAATCACTGGCATGTTATAATGGCCAGGAAATACAGAGAACAATCCAGTGCTTACCGGAGGAGAAGGTTAAGCCAATCTGCAAGTTTCACAAGGTCATCCTTGGAGGACCAAAATTCGAGCTTAGTAGGCATATCAAGTAGAGGCAGCCCAGGGACAGAACCCCCACAACCTCCACCTTATTGTGTCGTCCCCCATAATAACATCATGGCTAGTTTCCCATATGGTCAGTTCAGTGGAGCTAATGGTGGGGTTGACTATGGCTTCAATGCTCCACCCTACATGACTGCTGGATTTGAAGCATTCTCCAGCAGCAGCAAGCTGGCCCCTCATCCTCACACGGCCTTTTATGCTCATCATCGTTCATCATTTGATGTCATCCCGGGTGGTAGAGGCATTGACATGGTGGGAGGGGCTTTCGGGCAGAGCATTTATAGGGAAAGCAGGCCAAGTGAATATGAACTTCACTCTCTTAATGGCTTCTTCTATCCCCAAGAAGATAATTTCAACTCTTATATGATGCCGACAATGCAACAACCACCACAGTCAAGCTCAAACACAAATCCCAGTTTTCACAGCTGCTCACCAAATTCCATGGCCGCCAATGTTTCTTCCGTTGAAGCATCGTCATCAGAGAACAGAGATAAAGTACTGGGTCGTCGTCCTCCTCCATTCATCGACTTTCTCGGGGTCGGAGCTATATGA 1353 0.4738 MKAAWRNSLVYSSQEHPNALASSDLSSSSMGMVYADMGSLSLSSSSSEMGNNNVGGTSWGDFAFTRDHLPNTGTTDTNNDDALEGKASDSSTDPENLMDHNQENPNENSGVSTGKEADSGQSKLCARGHWRPAEDAKLKELVALYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRRAFTEEEEDRLMQAHRIYGNKWAMIARLFPGRTDNAVKNHWHVIMARKYREQSSAYRRRRLSQSASFTRSSLEDQNSSLVGISSRGSPGTEPPQPPPYCVVPHNNIMASFPYGQFSGANGGVDYGFNAPPYMTAGFEAFSSSSKLAPHPHTAFYAHHRSSFDVIPGGRGIDMVGGAFGQSIYRESRPSEYELHSLNGFFYPQEDNFNSYMMPTMQQPPQSSSNTNPSFHSCSPNSMAANVSSVEASSSENRDKVLGRRPPPFIDFLGVGAI 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1435 450 CDD SANT 181 221 IPR001005 -
Prci5g1435 450 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 174 228 IPR017930 -
Prci5g1435 450 FunFam MYB transcription factor 180 250 - -
Prci5g1435 450 FunFam MYB transcription factor 127 178 - -
Prci5g1435 450 ProSiteProfiles Myb-like domain profile. 127 173 IPR001005 -
Prci5g1435 450 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 127 173 IPR017930 -
Prci5g1435 450 MobiDBLite consensus disorder prediction 392 413 - -
Prci5g1435 450 MobiDBLite consensus disorder prediction 245 274 - -
Prci5g1435 450 PANTHER MYB PROTEIN-RELATED 116 381 - -
Prci5g1435 450 MobiDBLite consensus disorder prediction 245 267 - -
Prci5g1435 450 ProSiteProfiles Myb-like domain profile. 174 224 IPR001005 -
Prci5g1435 450 SUPERFAMILY Homeodomain-like 127 220 IPR009057 -
Prci5g1435 450 MobiDBLite consensus disorder prediction 89 119 - -
Prci5g1435 450 Gene3D - 180 250 - -
Prci5g1435 450 Pfam Myb-like DNA-binding domain 127 173 IPR001005 -
Prci5g1435 450 Pfam Myb-like DNA-binding domain 179 222 IPR001005 -
Prci5g1435 450 MobiDBLite consensus disorder prediction 1 25 - -
Prci5g1435 450 CDD SANT 130 171 IPR001005 -
Prci5g1435 450 Gene3D - 127 178 - -
Prci5g1435 450 MobiDBLite consensus disorder prediction 7 25 - -
Prci5g1435 450 SMART sant 178 226 IPR001005 -
Prci5g1435 450 SMART sant 126 175 IPR001005 -
Prci5g1435 450 MobiDBLite consensus disorder prediction 69 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g1435 Prci-Chr5 33601537 33604518 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g1435 30 239 MYB Transcription Factor Family AT1G69560 57.522 7.82e-77 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Prci5g1435 Myb_DNA-binding 1.7e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g1435 K09422 - gmx:100804537 371.703